ENSMUSG00000028972


Mus musculus

Features
Gene ID: ENSMUSG00000028972
  
Biological name :Car6
  
Synonyms : Car6 / Carbonic anhydrase 6 / P18761
  
Possible biological names infered from orthology : CA6 / P23280
  
Species: Mus musculus
  
Chr. number: 4
Strand: -1
Band: E2
Gene start: 150187015
Gene end: 150201332
  
Corresponding Affymetrix probe sets: 10518751 (MoGene1.0st)   1421001_a_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000101308
Ensembl peptide - ENSMUSP00000030817
NCBI entrez gene - 12353     See in Manteia.
MGI - MGI:1333786
RefSeq - NM_009802
RefSeq Peptide - NP_033932
swissprot - B1ARR4
swissprot - P18761
Ensembl - ENSMUSG00000028972
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ca6ENSDARG00000056499Danio rerio
 CA6ENSG00000131686Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Car12 / carbonic anhydrase 12 / CA12* / O43570*ENSMUSG0000003237332
Car9 / Q8VHB5 / Carbonic anhydrase 9 / CA9* / Q16790*ENSMUSG0000002846331
Car15 / Q99N23 / Carbonic anhydrase 15 ENSMUSG0000009023629
Car14 / Q9WVT6 / Mus musculus carbonic anhydrase 14 (Car14), transcript variant 2, mRNA. / CA14* / Q9ULX7* / carbonic anhydrase 14*ENSMUSG0000003852628
Car7 / Q9ERQ8 / Carbonic anhydrase 7 / CA7* / P43166*ENSMUSG0000003188328
Car1 / P13634 / Carbonic anhydrase 1 / CA1* / P00915*ENSMUSG0000002755628
Car13 / Q9D6N1 / Carbonic anhydrase 13 / CA13* / Q8N1Q1*ENSMUSG0000002755528
Car3 / P16015 / Carbonic anhydrase 3 / CA3* / P07451*ENSMUSG0000002755927
Car2 / P00920 / Mus musculus carbonic anhydrase 2 (Car2), transcript variant 2, mRNA. / CA2* / P00918* / carbonic anhydrase 2*ENSMUSG0000002756226
Car8 / P28651 / Carbonic anhydrase-related protein / CA8* / P35219* / carbonic anhydrase 8*ENSMUSG0000004126125
Car5a / P23589 / Carbonic anhydrase 5A, mitochondrial / CA5A* / P35218* / carbonic anhydrase 5A*ENSMUSG0000002531724
Car4 / Q64444 / Carbonic anhydrase 4 / CA4* / P22748*ENSMUSG0000000080524
Car5b / Q9QZA0 / Carbonic anhydrase 5B, mitochondrial / CA5B* / Q9Y2D0* / carbonic anhydrase 5B*ENSMUSG0000003137323


Protein motifs (from Interpro)
Interpro ID Name
 IPR001148  Alpha carbonic anhydrase domain
 IPR018428  Carbonic anhydrase, CA-VI
 IPR023561  Carbonic anhydrase, alpha-class
 IPR036398  Alpha carbonic anhydrase domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001580 detection of chemical stimulus involved in sensory perception of bitter taste ISO
 biological_processGO:0006730 one-carbon metabolic process IEA
 cellular_componentGO:0005576 extracellular region IEA
 cellular_componentGO:0005615 extracellular space ISO
 cellular_componentGO:0005737 cytoplasm IDA
 cellular_componentGO:0005829 cytosol IDA
 molecular_functionGO:0003674 molecular_function ND
 molecular_functionGO:0004089 carbonate dehydratase activity IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0016829 lyase activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Reversible hydration of carbon dioxide


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0002389 abnormal Peyer s patch follicle morphology "anomaly of the structure, development, or size of the Peyer s patch normally occupied by B cells" [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator, Immunobiology , The Immune System in Health and Disease:ISBN 0-8153-1691-7]
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Allelic Composition: Cers1to/Cers1to
Genetic Background: FVB/N-Cers1to

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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