ENSMUSG00000028996


Mus musculus

Features
Gene ID: ENSMUSG00000028996
  
Biological name :Rbp7
  
Synonyms : Q9EPC5 / Rbp7 / retinol binding protein 7, cellular
  
Possible biological names infered from orthology : Q96R05 / retinol binding protein 7
  
Species: Mus musculus
  
Chr. number: 4
Strand: -1
Band: E2
Gene start: 149449687
Gene end: 149454978
  
Corresponding Affymetrix probe sets: 10518674 (MoGene1.0st)   1449461_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000030848
Ensembl peptide - ENSMUSP00000119166
NCBI entrez gene - 63954     See in Manteia.
MGI - MGI:1890409
RefSeq - NM_022020
RefSeq Peptide - NP_071303
swissprot - F6R1Y3
swissprot - Q540P4
swissprot - Q9EPC5
Ensembl - ENSMUSG00000028996
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rbp7aENSDARG00000091906Danio rerio
 rbp7bENSDARG00000070486Danio rerio
 RBP7ENSGALG00000002637Gallus gallus
 RBP7ENSG00000162444Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Rbp1 / Q00915 / retinol binding protein 1, cellular / P09455* / retinol binding protein 1*ENSMUSG0000004640257
Rbp2 / Q08652 / retinol binding protein 2, cellular / P50120* / retinol binding protein 2*ENSMUSG0000003245456
Crabp1 / P62965 / Cellular retinoic acid-binding protein 1 / P29762*ENSMUSG0000003229140
Crabp2 / P22935 / Cellular retinoic acid-binding protein 2 / P29373*ENSMUSG0000000488540
Fabp12 / Q9DAK4 / Fatty acid-binding protein 12 / A6NFH5*ENSMUSG0000002753039
Fabp3 / P11404 / Fatty acid-binding protein, heart / P05413* / fatty acid binding protein 3*ENSMUSG0000002877338
Fabp4 / P04117 / Fatty acid-binding protein, adipocyte / P15090* / fatty acid binding protein 4*ENSMUSG0000006251538
Pmp2 / P24526 / peripheral myelin protein 2 / P02689*ENSMUSG0000005246837
Fabp9 / O08716 / Fatty acid-binding protein 9 / Q0Z7S8*ENSMUSG0000002752837
Fabp7 / P51880 / Fatty acid-binding protein, brain / O15540* / fatty acid binding protein 7*ENSMUSG0000001987435
Gm37389 / FABP9* / Q0Z7S8* / fatty acid binding protein 9*ENSMUSG0000010312429
Fabp5 / Q05816 / Fatty acid-binding protein, epidermal / Q01469* / fatty acid binding protein 5*ENSMUSG0000002753326


Protein motifs (from Interpro)
Interpro ID Name
 IPR000463  Cytosolic fatty-acid binding
 IPR000566  Lipocalin/cytosolic fatty-acid binding domain
 IPR012674  Calycin
 IPR031259  Intracellular lipid binding protein


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002138 retinoic acid biosynthetic process IEA
 biological_processGO:0006776 vitamin A metabolic process IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol IEA
 molecular_functionGO:0005501 retinoid binding IDA
 molecular_functionGO:0008289 lipid binding IEA
 molecular_functionGO:0016918 retinal binding IEA
 molecular_functionGO:0019841 retinol binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0011232 abnormal vitamin A level "any anomaly in the concentration of any of the vitamin A compounds, retinol, retinal (retinaldehyde) and retinoic acid; animals can not synthesize vitamin A de novo, but form it through oxidative cleavage of carotenoids supplied in the diet" [GO:0035238]
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Allelic Composition: Abcd1tm1Kds/Y,Abcd2tm1Apuj/Abcd2tm1Apuj
Genetic Background: involves: 129S1/Sv * 129S4/SvJae * 129X1/SvJ * C57BL/6J

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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