ENSMUSG00000032394


Mus musculus

Features
Gene ID: ENSMUSG00000032394
  
Biological name :Igdcc3
  
Synonyms : Igdcc3 / Immunoglobulin superfamily DCC subclass member 3 / Q8BQC3
  
Possible biological names infered from orthology : Q8IVU1
  
Species: Mus musculus
  
Chr. number: 9
Strand: 1
Band: C
Gene start: 65141189
Gene end: 65185872
  
Corresponding Affymetrix probe sets: 10586331 (MoGene1.0st)   1423496_a_at (Mouse Genome 430 2.0 Array)   1439498_at (Mouse Genome 430 2.0 Array)   1444981_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000034961
Ensembl peptide - ENSMUSP00000149084
NCBI entrez gene - 19289     See in Manteia.
MGI - MGI:1202390
RefSeq - XM_011242679
RefSeq - NM_008988
RefSeq - XM_006510873
RefSeq Peptide - NP_001344186
RefSeq Peptide - NP_033014
swissprot - Q8BQC3
Ensembl - ENSMUSG00000032394
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 igdcc3ENSDARG00000075158Danio rerio
 IGDCC3ENSGALG00000007371Gallus gallus
 IGDCC3ENSG00000174498Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Prtg / Q2EY15 / Protogenin / Q2VWP7*ENSMUSG0000003603038
Igdcc4 / Q9EQS9 / Immunoglobulin superfamily DCC subclass member 4 / Q8TDY8*ENSMUSG0000003281636
Neo1 / neogenin / Q92859* / neogenin 1*ENSMUSG0000003234026
Dcc / P70211 / Netrin receptor DCC / P43146* / DCC netrin 1 receptor*ENSMUSG0000006053426
Dscam / Q9ERC8 / Down syndrome cell adhesion molecule homolog / O60469* / DS cell adhesion molecule*ENSMUSG0000005027223
Sdk2 / Q6V4S5 / Protein sidekick-2 / Q58EX2* / sidekick cell adhesion molecule 2*ENSMUSG0000004159223
Sdk1 / Q3UH53 / Protein sidekick-1 / Q7Z5N4* / sidekick cell adhesion molecule 1*ENSMUSG0000003968323
Dscaml1 / DS cell adhesion molecule like 1 / Q8TD84*ENSMUSG0000003208722


Protein motifs (from Interpro)
Interpro ID Name
 IPR003598  Immunoglobulin subtype 2
 IPR003599  Immunoglobulin subtype
 IPR003961  Fibronectin type III
 IPR007110  Immunoglobulin-like domain
 IPR013098  Immunoglobulin I-set
 IPR013783  Immunoglobulin-like fold
 IPR036116  Fibronectin type III superfamily
 IPR036179  Immunoglobulin-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0050885 neuromuscular process controlling balance IMP
 cellular_componentGO:0005575 cellular_component ND
 cellular_componentGO:0005887 integral component of plasma membrane IDA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0003674 molecular_function ND
 molecular_functionGO:0005515 protein binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0001405 impaired coordination "reduced ability to execute integrated movements of muscle" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator, Stedman s Medical Dictionary , 27th edition:ISBN 0-683-40008-8]
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Allelic Composition: Rettm1Cos/Ret+,Wnt11tm1Amc/Wnt11tm1Amc
Genetic Background: involves: 129S/SvEv * 129S1/Sv * 129X1/SvJ * MF1

Allelic Composition: Igdcc3tm1.1Sms/Igdcc3tm1.1Sms
Genetic Background: involves: 129S1/Sv * 129X1/SvJ * C57BL/6

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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