ENSMUSG00000032340


Mus musculus

Features
Gene ID: ENSMUSG00000032340
  
Biological name :Neo1
  
Synonyms : Neo1 / neogenin
  
Possible biological names infered from orthology : neogenin 1 / Q92859
  
Species: Mus musculus
  
Chr. number: 9
Strand: -1
Band: B
Gene start: 58874687
Gene end: 59036441
  
Corresponding Affymetrix probe sets: 10594110 (MoGene1.0st)   1423513_at (Mouse Genome 430 2.0 Array)   1434931_at (Mouse Genome 430 2.0 Array)   1440789_at (Mouse Genome 430 2.0 Array)   1444295_at (Mouse Genome 430 2.0 Array)   1447693_s_at (Mouse Genome 430 2.0 Array)   1447694_x_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000150600
Ensembl peptide - ENSMUSP00000063656
Ensembl peptide - ENSMUSP00000149424
NCBI entrez gene - 18007     See in Manteia.
MGI - MGI:1097159
RefSeq - XM_006510847
RefSeq - XM_006510842
RefSeq - XM_006510843
RefSeq - XM_006510844
RefSeq - XM_006510845
RefSeq - XM_006510846
RefSeq - NM_001042752
RefSeq - NM_008684
RefSeq Peptide - NP_001036217
RefSeq Peptide - NP_032710
swissprot - E9QK04
swissprot - Q7TQG5
swissprot - A0A1L1SRD6
Ensembl - ENSMUSG00000032340
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 neo1aENSDARG00000102855Danio rerio
 neo1bENSDARG00000075100Danio rerio
 NEO1ENSGALG00000001774Gallus gallus
 NEO1ENSG00000067141Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Dcc / P70211 / Netrin receptor DCC / P43146* / DCC netrin 1 receptor*ENSMUSG0000006053450
Sdk1 / Q3UH53 / Protein sidekick-1 / Q7Z5N4* / sidekick cell adhesion molecule 1*ENSMUSG0000003968323
Sdk2 / Q6V4S5 / Protein sidekick-2 / Q58EX2* / sidekick cell adhesion molecule 2*ENSMUSG0000004159222
Dscaml1 / DS cell adhesion molecule like 1 / Q8TD84*ENSMUSG0000003208721
Dscam / Q9ERC8 / Down syndrome cell adhesion molecule homolog / O60469* / DS cell adhesion molecule*ENSMUSG0000005027220
Prtg / Q2EY15 / Protogenin / Q2VWP7*ENSMUSG0000003603020
Igdcc4 / Q9EQS9 / Immunoglobulin superfamily DCC subclass member 4 / Q8TDY8*ENSMUSG0000003281619
Igdcc3 / Q8BQC3 / Immunoglobulin superfamily DCC subclass member 3 / Q8IVU1*ENSMUSG0000003239414


Protein motifs (from Interpro)
Interpro ID Name
 IPR003598  Immunoglobulin subtype 2
 IPR003599  Immunoglobulin subtype
 IPR003961  Fibronectin type III
 IPR007110  Immunoglobulin-like domain
 IPR010560  Neogenin, C-terminal
 IPR013098  Immunoglobulin I-set
 IPR013783  Immunoglobulin-like fold
 IPR033024  Neogenin
 IPR036116  Fibronectin type III superfamily
 IPR036179  Immunoglobulin-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007399 nervous system development IEA
 biological_processGO:0007411 axon guidance IEA
 biological_processGO:0030513 positive regulation of BMP signaling pathway IEA
 biological_processGO:0055072 iron ion homeostasis IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0005887 integral component of plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0098797 plasma membrane protein complex IEA
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0039706 co-receptor binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0000628 abnormal mammary gland development "aberration in the differentiation of the mammary gland during early embryogenesis or during sexual maturity" [Stedman s Medical Dictionary:ISBN 0-683-40008-8]
Show

Allelic Composition: Dcckanga/Dcctm1Wbg
Genetic Background: involves: 129X1/SvJ * AKR * C3H

 MP:0001065 abnormal trigeminal nerve morphology "malformed chief sensory nerve of the face and motor nerve of the muscles of mastication; has three major divisions: ophthalmic, maxillary and mandibular " [Stedman s Medical Dictionary:ISBN 0-683-40008-8, Principles of Neural Science:ISBN 0-8385-8034-3, J:33038]
Show

Allelic Composition: Unc5crcmTg(Ucp)1.23Kz/Unc5crcmTg(Ucp)1.23Kz
Genetic Background: B6.Cg-Unc5crcmTg(Ucp)1.23Kz

 MP:0011089 complete perinatal lethality "death of all organisms of a given genotype in a population within the perinatal period (Mus: E18.5 through postnatal day 1)" [MGI:csmith]
Show

Allelic Composition: Dcckanga/Dcctm1Wbg
Genetic Background: involves: 129X1/SvJ * AKR * C3H

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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