ENSMUSG00000035051


Mus musculus

Features
Gene ID: ENSMUSG00000035051
  
Biological name :Dhx57
  
Synonyms : Dhx57 / Putative ATP-dependent RNA helicase DHX57 / Q6P5D3
  
Possible biological names infered from orthology : DExH-box helicase 57 / Q6P158
  
Species: Mus musculus
  
Chr. number: 17
Strand: -1
Band: E3
Gene start: 80238304
Gene end: 80290476
  
Corresponding Affymetrix probe sets: 10453114 (MoGene1.0st)   1426907_s_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000041069
Ensembl peptide - ENSMUSP00000083742
NCBI entrez gene - 106794     See in Manteia.
MGI - MGI:2147067
RefSeq - XM_017317203
RefSeq - NM_001163759
RefSeq - NM_198942
RefSeq - XM_006523449
RefSeq - XM_006523451
RefSeq - XM_017317202
RefSeq - XM_006523447
RefSeq - XM_006523448
RefSeq Peptide - NP_945180
RefSeq Peptide - NP_001157231
swissprot - Q6P5D3
Ensembl - ENSMUSG00000035051
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 dhx57ENSDARG00000057660Danio rerio
 DHX57ENSGALG00000041558Gallus gallus
 DHX57ENSG00000163214Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Dhx29 / Q6PGC1 / ATP-dependent RNA helicase DHX29 / Q7Z478* / DExH-box helicase 29*ENSMUSG0000004242630
Dhx36 / Q8VHK9 / ATP-dependent RNA helicase DHX36 / Q9H2U1* / DEAH-box helicase 36*ENSMUSG0000002777029
B2RR83 / Ythdc2 / YTH domain containing 2 / Q9H6S0*ENSMUSG0000003465326
Dhx9 / DExH-box helicase 9 / Q08211*ENSMUSG0000004269925
Dhx30 / Q99PU8 / Putative ATP-dependent RNA helicase DHX30 / Q7L2E3* / DExH-box helicase 30*ENSMUSG0000003248024
Tdrd9 / Q14BI7 / ATP-dependent RNA helicase TDRD9 / Q8NDG6* / tudor domain containing 9*ENSMUSG0000005400319


Protein motifs (from Interpro)
Interpro ID Name
 IPR000571  Zinc finger, CCCH-type
 IPR001650  Helicase, C-terminal
 IPR006575  RWD domain
 IPR007502  Helicase-associated domain
 IPR009060  UBA-like superfamily
 IPR011545  DEAD/DEAH box helicase domain
 IPR011709  Domain of unknown function DUF1605
 IPR014001  Helicase superfamily 1/2, ATP-binding domain
 IPR015940  Ubiquitin-associated domain
 IPR016135  Ubiquitin-conjugating enzyme/RWD-like
 IPR027417  P-loop containing nucleoside triphosphate hydrolase
 IPR036855  Zinc finger, CCCH-type superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006396 RNA processing IBA
 cellular_componentGO:0005739 mitochondrion IBA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IBA
 molecular_functionGO:0004004 ATP-dependent RNA helicase activity IBA
 molecular_functionGO:0004386 helicase activity IEA
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr