Manteia

ENSMUSG00000035435

Mus musculus

Features

Gene ID:	ENSMUSG00000035435

Biological name :	Abca17

Synonyms :	Abca17 / ATP-binding cassette, sub-family A (ABC1), member 17 / E9PX95

Possible biological names infered from orthology :

Species:	Mus musculus

Chr. number:	17
Strand:	-1
Band:	A3.3
Gene start:	24264259
Gene end:	24351029

Corresponding Affymetrix probe sets:	10448527 (MoGene1.0st)

Cross references:	Ensembl peptide - ENSMUSP00000046218 Ensembl peptide - ENSMUSP00000112538 NCBI entrez gene - 381072 See in Manteia. MGI - MGI:3625331 RefSeq - XM_017317539 RefSeq - NM_001031621 RefSeq - XM_017317537 RefSeq - XM_017317538 RefSeq - XM_006524476 RefSeq - XM_006524477 RefSeq - XM_006524478 RefSeq - XM_006524479 RefSeq - XM_006524481 RefSeq - XM_017317532 RefSeq - XM_017317533 RefSeq - XM_017317534 RefSeq - XM_017317536 RefSeq Peptide - NP_001026792 swissprot - E9PX95 Ensembl - ENSMUSG00000035435

See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed

Ortholog prediction (from Ensembl)

Ortholog name	ID	Species
abca3b	ENSDARG00000100524	Danio rerio
ABCA3	ENSGALG00000037837	Gallus gallus

Paralog prediction (from Ensembl)

Paralog name	ID	Similarity(%)
Abca3 / Q8R420 / ATP-binding cassette, sub-family A (ABC1), member 3 / Q99758* / ATP binding cassette subfamily A member 3*	ENSMUSG00000024130	53
Abca15 / ATP-binding cassette, sub-family A (ABC1), member 15	ENSMUSG00000054746	41
Abca14 / ATP-binding cassette, sub-family A (ABC1), member 14	ENSMUSG00000062017	40
Abca16 / ATP-binding cassette, sub-family A (ABC1), member 16	ENSMUSG00000051900	39
Abca2 / ATP-binding cassette, sub-family A (ABC1), member 2 / Q9BZC7* / ATP binding cassette subfamily A member 2*	ENSMUSG00000026944	32
Abca1 / P41233 / ATP-binding cassette, sub-family A (ABC1), member 1 / O95477* / ATP binding cassette subfamily A member 1*	ENSMUSG00000015243	32
Abca4 / O35600 / ATP-binding cassette, sub-family A (ABC1), member 4 / P78363* / ATP binding cassette subfamily A member 4*	ENSMUSG00000028125	31
Abca7 / Q91V24 / ATP-binding cassette, sub-family A (ABC1), member 7 / Q8IZY2* / ATP binding cassette subfamily A member 7*	ENSMUSG00000035722	31
Abca12 / ATP-binding cassette, sub-family A (ABC1), member 12 / Q86UK0* / ATP binding cassette subfamily A member 12*	ENSMUSG00000050296	28
Abca13 / Q5SSE9 / ATP-binding cassette, sub-family A (ABC1), member 13 / Q86UQ4* / ATP binding cassette subfamily A member 13*	ENSMUSG00000004668	27
Q8K440 / Abca8b / ATP-binding cassette, sub-family A (ABC1), member 8b / ABCA8* / O94911* / ATP binding cassette subfamily A member 8*	ENSMUSG00000020620	22
Abca5 / Q8K448 / ATP-binding cassette, sub-family A (ABC1), member 5 / Q8WWZ7* / ATP binding cassette subfamily A member 5*	ENSMUSG00000018800	22
Abca9 / Q8K449 / ATP-binding cassette, sub-family A (ABC1), member 9 / Q8IUA7* / ATP binding cassette subfamily A member 9*	ENSMUSG00000041797	21
Abca8a / Q8K442 / ATP-binding cassette, sub-family A (ABC1), member 8a	ENSMUSG00000041828	21
Abca6 / Q8K441 / ATP-binding cassette, sub-family A (ABC1), member 6 / Q8N139* / ATP binding cassette subfamily A member 6*	ENSMUSG00000044749	20

Protein motifs (from Interpro)

Interpro ID	Name
IPR003439	ABC transporter-like
IPR003593	AAA+ ATPase domain
IPR017871	ABC transporter, conserved site
IPR026082	ABC transporter A
IPR027417	P-loop containing nucleoside triphosphate hydrolase

Gene Ontology (GO)

Type	GO ID	Term	Ev.Code
biological_process	GO:0006629	lipid metabolic process	IEA
biological_process	GO:0006638	neutral lipid metabolic process	IDA
biological_process	GO:0006869	lipid transport	IBA
biological_process	GO:0055085	transmembrane transport	IEA
cellular_component	GO:0005737	cytoplasm	IEA
cellular_component	GO:0005783	endoplasmic reticulum	IDA
cellular_component	GO:0005789	endoplasmic reticulum membrane	IEA
cellular_component	GO:0016020	membrane	IEA
cellular_component	GO:0016021	integral component of membrane	IEA
molecular_function	GO:0000166	nucleotide binding	IEA
molecular_function	GO:0005524	ATP binding	IEA
molecular_function	GO:0016887	ATPase activity	IEA
molecular_function	GO:0042626	ATPase activity, coupled to transmembrane movement of substances	IBA

Pathways (from Reactome)

Pathway description

No match

Phenotype (from MGI, Zfin or HPO)

Phenotype

Definition

Genetic BG

No match

Interacting proteins (from Reactome)

Interactor ID

Name

Interaction type

No match

0 s.

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		© Olivier Tassy / Olivier Pourquie 2007-2024 contact: otassy@igbmc.fr