ENSDARG00000034930


Danio rerio

Features
Gene ID: ENSDARG00000034930
  
Biological name :cx52.6
  
Synonyms : connexin 52.6 / cx52.6
  
Possible biological names infered from orthology : gap junction protein alpha 10 / GJA10 / Q969M2 / Q9WUS4
  
Species: Danio rerio
  
Chr. number: 20
Strand: 1
Band:
Gene start: 23960525
Gene end: 23964383
  
Corresponding Affymetrix probe sets: DrAffx.1.43.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000042122
NCBI entrez gene - 404207     See in Manteia.
RefSeq - XM_005160517
swissprot - F6NP30
ZFIN ID - ZDB-GENE-040310-6
Ensembl - ENSDARG00000034930
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 GJA10ENSGALG00000015606Gallus gallus
 GJA10ENSG00000135355Homo sapiens
 Gja10ENSMUSG00000051056Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
cx52.7 / connexin 52.7 / GJA10* / Q9WUS4* / Q969M2* / gap junction protein alpha 10*ENSDARG0000005779259
cx52.9 / connexin 52.9 / GJA9* / P57773* / gap junction protein alpha 9*ENSDARG0000008645344
gja8a / gap junction protein alpha 8 paralog a / GJA8* / P28236* / P48165* / gap junction protein alpha 8*ENSDARG0000006945132
gja3 / gap junction protein, alpha 3 / Q64448* / Q9Y6H8*ENSDARG0000002188931
gja5a / gap junction protein, alpha 5a / GJA5* / P36382* / Q01231* / gap junction protein alpha 5*ENSDARG0000004006531
cx39.9 / connexin 39.9ENSDARG0000000408230
gja8b / gap junction protein alpha 8 paralog b / GJA8* / P28236* / P48165* / gap junction protein alpha 8*ENSDARG0000001507630
cx43 / O57474 / connexin 43ENSDARG0000004179929
gja5b / gap junction protein, alpha 5b / GJA5* / P36382* / Q01231* / gap junction protein alpha 5*ENSDARG0000006945028
cx34.5 / connexin 34.5ENSDARG0000006941127
cx32.3 / connexin 32.3ENSDARG0000004178726
cx40.8 / connexin 40.8 / GJA1* / P23242* / P17302* / gap junction protein alpha 1*ENSDARG0000007119226
cx39.4 / connexin 39.4 / GJA4* / P35212* / P28235* / gap junction protein alpha 4*ENSDARG0000007035725
cx28.9 / connexin 28.9ENSDARG0000004179724
cx32.2 / Q7T047 / connexin 32.2ENSDARG0000007678924
cx43.4 / connexin 43.4ENSDARG0000000709923
cx44.2 / connexin 44.2 / si:dkey-91f15.8ENSDARG0000003420723
si:dkey-91f15.1ENSDARG0000009499023
cx36.7 / connexin 36.7ENSDARG0000001792722
gjd2b / gap junction protein delta 2b / GJD2* / O54851* / Q9UKL4* / gap junction protein delta 2*ENSDARG0000007078122


Protein motifs (from Interpro)
Interpro ID Name
 IPR000500  Connexin
 IPR013092  Connexin, N-terminal
 IPR017990  Connexin, conserved site
 IPR019570  Gap junction protein, cysteine-rich domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007154 cell communication IEA
 biological_processGO:0055085 transmembrane transport IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0005921 gap junction ISS
 cellular_componentGO:0005922 connexin complex IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030054 cell junction IEA
 molecular_functionGO:0005243 gap junction channel activity IDA
 molecular_functionGO:0055077 gap junction hemi-channel activity IMP


Pathways (from Reactome)
Pathway description
Electric Transmission Across Gap Junctions


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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