ENSDARG00000073896


Danio rerio

Features
Gene ID: ENSDARG00000073896
  
Biological name :cx47.1
  
Synonyms : connexin 47.1 / cx47.1
  
Possible biological names infered from orthology : gap junction protein gamma 2 / GJC2 / Q5T442 / Q8BQU6
  
Species: Danio rerio
  
Chr. number: 2
Strand: 1
Band:
Gene start: 3472832
Gene end: 3498451
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000102358
NCBI entrez gene - 447835     See in Manteia.
RefSeq - NM_001004574
RefSeq Peptide - NP_001004574
swissprot - Q66HV7
ZFIN ID - ZDB-GENE-040912-134
Ensembl - ENSDARG00000073896
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 GJC2ENSGALG00000005331Gallus gallus
 GJC2ENSG00000198835Homo sapiens
 Gjc2ENSMUSG00000043448Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
cx43.4 / connexin 43.4ENSDARG0000000709950
cx44.2 / connexin 44.2 / si:dkey-91f15.8ENSDARG0000003420747
si:dkey-91f15.1ENSDARG0000009499047
gja3 / gap junction protein, alpha 3 / Q64448* / Q9Y6H8*ENSDARG0000002188931
cx39.9 / connexin 39.9ENSDARG0000000408228
cx34.5 / connexin 34.5ENSDARG0000006941128
gja8a / gap junction protein alpha 8 paralog a / GJA8* / P28236* / P48165* / gap junction protein alpha 8*ENSDARG0000006945128
gja8b / gap junction protein alpha 8 paralog b / GJA8* / P28236* / P48165* / gap junction protein alpha 8*ENSDARG0000001507627
cx43 / O57474 / connexin 43ENSDARG0000004179927
gjd2b / gap junction protein delta 2b / GJD2* / O54851* / Q9UKL4* / gap junction protein delta 2*ENSDARG0000007078127
cx52.6 / connexin 52.6 / GJA10* / Q9WUS4* / Q969M2* / gap junction protein alpha 10*ENSDARG0000003493026
gja5a / gap junction protein, alpha 5a / GJA5* / P36382* / Q01231* / gap junction protein alpha 5*ENSDARG0000004006526
cx52.7 / connexin 52.7 / GJA10* / Q9WUS4* / Q969M2* / gap junction protein alpha 10*ENSDARG0000005779226
gja5b / gap junction protein, alpha 5b / GJA5* / P36382* / Q01231* / gap junction protein alpha 5*ENSDARG0000006945026
cx40.8 / connexin 40.8 / GJA1* / P23242* / P17302* / gap junction protein alpha 1*ENSDARG0000007119226
cx52.9 / connexin 52.9 / GJA9* / P57773* / gap junction protein alpha 9*ENSDARG0000008645326
cx36.7 / connexin 36.7ENSDARG0000001792725
cx32.3 / connexin 32.3ENSDARG0000004178725
cx28.9 / connexin 28.9ENSDARG0000004179725
CABZ01084793.1ENSDARG0000006799925


Protein motifs (from Interpro)
Interpro ID Name
 IPR000500  Connexin
 IPR013092  Connexin, N-terminal
 IPR017990  Connexin, conserved site
 IPR019570  Gap junction protein, cysteine-rich domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007154 cell communication IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0005921 gap junction IEA
 cellular_componentGO:0005922 connexin complex IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030054 cell junction IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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