ENSDARG00000003811


Danio rerio

Features
Gene ID: ENSDARG00000003811
  
Biological name :plxnb2a
  
Synonyms : plexin b2a / plxnb2a
  
Possible biological names infered from orthology : B2RXS4 / O15031 / plexin B2 / PLXNB2
  
Species: Danio rerio
  
Chr. number: 4
Strand: -1
Band:
Gene start: 14449233
Gene end: 14531687
  
Corresponding Affymetrix probe sets: Dr.19979.1.S1_at (Zebrafish Array)   Dr.2468.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000145608
Ensembl peptide - ENSDARP00000048820
Ensembl peptide - ENSDARP00000122721
Ensembl peptide - ENSDARP00000130290
NCBI entrez gene - 561433     See in Manteia.
RefSeq - NM_001161600
RefSeq - XM_009300284
RefSeq Peptide - NP_001155072
swissprot - F1QBC0
swissprot - A0A0R4IB44
swissprot - Q5RH91
ZFIN ID - ZDB-GENE-030131-8917
Ensembl - ENSDARG00000003811
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PLXNB2ENSGALG00000039861Gallus gallus
 O15031ENSG00000196576Homo sapiens
 B2RXS4ENSMUSG00000036606Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
plxnb2b / plexin b2b / O15031* / PLXNB2* / plexin B2*ENSDARG0000003698566
plxnb1b / plexin b1b / O43157* / PLXNB1* / plexin B1*ENSDARG0000001721141
plxnb3 / plexin B3 / Q9QY40* / Q9ULL4*ENSDARG0000003299038
plxnb1a / plexin b1a / PLXNB1* / O43157* / Q8CJH3* / plexin B1*ENSDARG0000007582134
plxna4 / plexin A4 / Q80UG2* / Q9HCM2*ENSDARG0000001932832
plxna1a / plexin A1a / PLXNA1* / Q9UIW2* / plexin A1*ENSDARG0000010545231
plxna3 / plexin A3 / P51805* / P70208*ENSDARG0000000717230
plxna2 / plexin A2 / O75051* / P70207*ENSDARG0000006037230
plxnb2a / plexin b2a / O15031* / B2RXS4* / PLXNB2* / plexin B2*ENSDARG0000009479929
si:dkey-183c2.4 / B2RXS4* / O15031* / PLXNB2* / plexin B2*ENSDARG0000007989228
LO018148.1 / PLXNA1* / Q9UIW2* / plexin A1*ENSDARG0000011482328
si:ch211-127b11.1 / B2RXS4* / O15031* / PLXNB2* / plexin B2*ENSDARG0000007709022
plxnc1 / plexin C1 / O60486* / Q9QZC2*ENSDARG0000001527817
plxnd1 / plexin D1 / Q3UH93* / Q9Y4D7*ENSDARG000000860574


Protein motifs (from Interpro)
Interpro ID Name
 IPR001627  Sema domain
 IPR002165  Plexin repeat
 IPR002909  IPT domain
 IPR008936  Rho GTPase activation protein
 IPR013548  Plexin, cytoplasmic RasGAP domain
 IPR013783  Immunoglobulin-like fold
 IPR014756  Immunoglobulin E-set
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR016201  PSI domain
 IPR031148  Plexin family


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002040 sprouting angiogenesis IMP
 biological_processGO:0007162 negative regulation of cell adhesion IBA
 biological_processGO:0007165 signal transduction IEA
 biological_processGO:0008360 regulation of cell shape IBA
 biological_processGO:0043087 regulation of GTPase activity IBA
 biological_processGO:0050772 positive regulation of axonogenesis IBA
 biological_processGO:0071526 semaphorin-plexin signaling pathway IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0017154 semaphorin receptor activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0001073 axial vasculature axial vasculature has fewer parts of type intersegmental vessel , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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