ENSDARG00000032990


Danio rerio

Features
Gene ID: ENSDARG00000032990
  
Biological name :plxnb3
  
Synonyms : plexin B3 / plxnb3
  
Possible biological names infered from orthology : Q9QY40 / Q9ULL4
  
Species: Danio rerio
  
Chr. number: 8
Strand: 1
Band:
Gene start: 8166285
Gene end: 8282555
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000113727
Ensembl peptide - ENSDARP00000121104
Ensembl peptide - ENSDARP00000016098
NCBI entrez gene - 566546     See in Manteia.
swissprot - B0V1S6
swissprot - F1Q6L2
swissprot - F1R7J5
ZFIN ID - ZDB-GENE-081104-53
Ensembl - ENSDARG00000032990
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PLXNB3ENSG00000198753Homo sapiens
 Plxnb3ENSMUSG00000031385Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
plxnb1b / plexin b1b / O43157* / PLXNB1* / plexin B1*ENSDARG0000001721153
plxnb1a / plexin b1a / PLXNB1* / O43157* / Q8CJH3* / plexin B1*ENSDARG0000007582144
plxnb2a / plexin b2a / O15031* / B2RXS4* / PLXNB2* / plexin B2*ENSDARG0000000381138
plxnb2b / plexin b2b / O15031* / PLXNB2* / plexin B2*ENSDARG0000003698538
plxna3 / plexin A3 / P51805* / P70208*ENSDARG0000000717235
plxna4 / plexin A4 / Q80UG2* / Q9HCM2*ENSDARG0000001932834
plxna1a / plexin A1a / PLXNA1* / Q9UIW2* / plexin A1*ENSDARG0000010545233
plxna2 / plexin A2 / O75051* / P70207*ENSDARG0000006037233
LO018148.1 / PLXNA1* / Q9UIW2* / plexin A1*ENSDARG0000011482330
plxnc1 / plexin C1 / O60486* / Q9QZC2*ENSDARG0000001527816
plxnb2a / plexin b2a / O15031* / B2RXS4* / PLXNB2* / plexin B2*ENSDARG000000947999
si:dkey-183c2.4 / B2RXS4* / O15031* / PLXNB2* / plexin B2*ENSDARG000000798929
si:ch211-127b11.1 / B2RXS4* / O15031* / PLXNB2* / plexin B2*ENSDARG000000770907
plxnd1 / plexin D1 / Q3UH93* / Q9Y4D7*ENSDARG000000860575


Protein motifs (from Interpro)
Interpro ID Name
 IPR001627  Sema domain
 IPR002165  Plexin repeat
 IPR002909  IPT domain
 IPR008936  Rho GTPase activation protein
 IPR013548  Plexin, cytoplasmic RasGAP domain
 IPR013783  Immunoglobulin-like fold
 IPR014756  Immunoglobulin E-set
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR016201  PSI domain
 IPR031148  Plexin family


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007162 negative regulation of cell adhesion IBA
 biological_processGO:0007165 signal transduction IEA
 biological_processGO:0008360 regulation of cell shape IBA
 biological_processGO:0043087 regulation of GTPase activity IBA
 biological_processGO:0048675 axon extension IBA
 biological_processGO:0050772 positive regulation of axonogenesis IBA
 biological_processGO:0071526 semaphorin-plexin signaling pathway IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0017154 semaphorin receptor activity IEA


Pathways (from Reactome)
Pathway description
Other semaphorin interactions


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000058821 sema5a / sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A / Q13591* / semaphorin 5A*  / reaction / complex






 

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