ENSDARG00000075821


Danio rerio

Features
Gene ID: ENSDARG00000075821
  
Biological name :plxnb1a
  
Synonyms : plexin b1a / plxnb1a
  
Possible biological names infered from orthology : O43157 / plexin B1 / PLXNB1 / Q8CJH3
  
Species: Danio rerio
  
Chr. number: 23
Strand: -1
Band:
Gene start: 9938236
Gene end: 10137322
  
Corresponding Affymetrix probe sets: Dr.1619.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000117546
Ensembl peptide - ENSDARP00000138525
Ensembl peptide - ENSDARP00000098140
Ensembl peptide - ENSDARP00000113338
Ensembl peptide - ENSDARP00000117176
swissprot - A0A0R4IRZ9
swissprot - E9QFZ9
swissprot - F1QKI9
swissprot - F1QPY6
swissprot - F1QZQ3
ZFIN ID - ZDB-GENE-050302-63
Ensembl - ENSDARG00000075821
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PLXNB1ENSGALG00000006526Gallus gallus
 O43157ENSG00000164050Homo sapiens
 Plxnb1ENSMUSG00000053646Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
plxnb1b / plexin b1b / O43157* / PLXNB1* / plexin B1*ENSDARG0000001721160
plxnb3 / plexin B3 / Q9QY40* / Q9ULL4*ENSDARG0000003299043
plxnb2b / plexin b2b / O15031* / PLXNB2* / plexin B2*ENSDARG0000003698533
plxnb2a / plexin b2a / O15031* / B2RXS4* / PLXNB2* / plexin B2*ENSDARG0000000381132
plxna4 / plexin A4 / Q80UG2* / Q9HCM2*ENSDARG0000001932828
plxna3 / plexin A3 / P51805* / P70208*ENSDARG0000000717228
plxna2 / plexin A2 / O75051* / P70207*ENSDARG0000006037228
plxna1a / plexin A1a / PLXNA1* / Q9UIW2* / plexin A1*ENSDARG0000010545227
LO018148.1 / PLXNA1* / Q9UIW2* / plexin A1*ENSDARG0000011482325
plxnc1 / plexin C1 / O60486* / Q9QZC2*ENSDARG0000001527813
si:dkey-183c2.4 / B2RXS4* / O15031* / PLXNB2* / plexin B2*ENSDARG000000798929
plxnb2a / plexin b2a / O15031* / B2RXS4* / PLXNB2* / plexin B2*ENSDARG000000947999
si:ch211-127b11.1 / B2RXS4* / O15031* / PLXNB2* / plexin B2*ENSDARG000000770907
plxnd1 / plexin D1 / Q3UH93* / Q9Y4D7*ENSDARG000000860575


Protein motifs (from Interpro)
Interpro ID Name
 IPR001627  Sema domain
 IPR002165  Plexin repeat
 IPR002909  IPT domain
 IPR008936  Rho GTPase activation protein
 IPR013548  Plexin, cytoplasmic RasGAP domain
 IPR013783  Immunoglobulin-like fold
 IPR014756  Immunoglobulin E-set
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR016201  PSI domain
 IPR031148  Plexin family


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007162 negative regulation of cell adhesion IBA
 biological_processGO:0007165 signal transduction IEA
 biological_processGO:0008360 regulation of cell shape IBA
 biological_processGO:0043087 regulation of GTPase activity IBA
 biological_processGO:0048675 axon extension IMP
 biological_processGO:0050772 positive regulation of axonogenesis IBA
 biological_processGO:0071526 semaphorin-plexin signaling pathway IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0017154 semaphorin receptor activity IEA


Pathways (from Reactome)
Pathway description
G alpha (12/13) signalling events
Sema4D mediated inhibition of cell attachment and migration
Sema4D induced cell migration and growth-cone collapse


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0001056 myotome myotome CaP motoneuron hypoplastic , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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