Manteia

ENSDARG00000006915

Danio rerio

Features

Gene ID:	ENSDARG00000006915

Biological name :	arl8ba

Synonyms :	ADP-ribosylation factor-like 8Ba / arl8ba / Q6NZW8

Possible biological names infered from orthology :	ADP ribosylation factor like GTPase 8B / ADP-ribosylation factor-like protein 8B / ARL8B / Q9CQW2 / Q9NVJ2

Species:	Danio rerio

Chr. number:	6
Strand:	-1
Band:
Gene start:	42951960
Gene end:	42971184

Corresponding Affymetrix probe sets:	Dr.7615.1.A1_at (Zebrafish Array)

Cross references:	Ensembl peptide - ENSDARP00000019311 Ensembl peptide - ENSDARP00000125359 NCBI entrez gene - 337424 See in Manteia. swissprot - H0WET1 swissprot - Q6NZW8 ZFIN ID - ZDB-GENE-030131-9370 Ensembl - ENSDARG00000006915

See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed

Ortholog prediction (from Ensembl)

Ortholog name	ID	Species
ARL8B	ENSGALG00000008314	Gallus gallus
ARL8BL	ENSGALG00000031527	Gallus gallus
ARL8B	ENSG00000134108	Homo sapiens
Arl8b	ENSMUSG00000030105	Mus musculus

Paralog prediction (from Ensembl)

Paralog name	ID	Similarity(%)
arl8bb / ADP-ribosylation factor-like 8Bb	ENSDARG00000070318	94
arl8a / ADP-ribosylation factor-like 8A / Q8VEH3* / Q96BM9* / ADP ribosylation factor like GTPase 8A* / ADP-ribosylation factor-like protein 8A *	ENSDARG00000078686	91
arf2b / ADP-ribosylation factor 2b / Arf2* / Q8BSL7* / ADP-ribosylation factor 2 *	ENSDARG00000016393	34
arf2a / ADP-ribosylation factor 2a	ENSDARG00000014763	34
arf1 / ADP-ribosylation factor 1	ENSDARG00000009484	33
arf3a / ADP-ribosylation factor 3a / ARF3* / P61204* / P61205* / ADP ribosylation factor 3*	ENSDARG00000070539	33
arl3 / Q1MTE5 / ADP-ribosylation factor-like 3 / P36405* / Q9WUL7* / ADP ribosylation factor like GTPase 3* / ADP-ribosylation factor-like protein 3 *	ENSDARG00000071409	33
arf3b / ADP-ribosylation factor 3b	ENSDARG00000036998	33
arl2 / ADP-ribosylation factor-like 2 / Q9D0J4* / P36404* / ARL2-SNX15* / ADP ribosylation factor like GTPase 2* / ARL2-SNX15 readthrough (NMD candidate)* / ADP-ribosylation factor-like protein 2 *	ENSDARG00000069496	33
arf5 / ADP-ribosylation factor 5 / P84085*	ENSDARG00000070472	32
arf6a / ADP-ribosylation factor 6a / ARF6* / P62330* / ADP ribosylation factor 6*	ENSDARG00000101626	32
zgc:77650 / ARF5* / P84084* / P84085* / ADP ribosylation factor 5*	ENSDARG00000113899	32
zgc:110197 / ARL3 (1 of many) / ARL3* / P36405* / Q9WUL7* / ADP ribosylation factor like GTPase 3* / ADP-ribosylation factor-like protein 3 *	ENSDARG00000056794	32
arf6b / ADP-ribosylation factor 6b / ARF6* / P62330* / P62331* / ADP ribosylation factor 6*	ENSDARG00000052928	32
arf4a / ADP-ribosylation factor 4a / ARF5* / P84084* / P84085* / ADP ribosylation factor 5*	ENSDARG00000045989	31
zgc:110286	ENSDARG00000074210	30
arl3l2 / ADP-ribosylation factor-like 3, like 2	ENSDARG00000015404	30
arf4b / ADP-ribosylation factor 4b	ENSDARG00000100339	30
arl3l1 / ADP-ribosylation factor-like 3, like 1	ENSDARG00000111106	29
si:ch1073-165f9.2	ENSDARG00000073876	28

Protein motifs (from Interpro)

Interpro ID	Name
IPR005225	Small GTP-binding protein domain
IPR006689	Small GTPase superfamily, ARF/SAR type
IPR024156	Small GTPase superfamily, ARF type
IPR027417	P-loop containing nucleoside triphosphate hydrolase

Gene Ontology (GO)

Type	GO ID	Term	Ev.Code
biological_process	GO:0007049	cell cycle	IEA
biological_process	GO:0007059	chromosome segregation	IEA
biological_process	GO:0051301	cell division	IEA
cellular_component	GO:0005622	intracellular	IEA
cellular_component	GO:0005737	cytoplasm	IEA
cellular_component	GO:0005764	lysosome	IEA
cellular_component	GO:0005765	lysosomal membrane	IEA
cellular_component	GO:0005768	endosome	IEA
cellular_component	GO:0005819	spindle	IEA
cellular_component	GO:0005856	cytoskeleton	IEA
cellular_component	GO:0016020	membrane	IEA
cellular_component	GO:0031902	late endosome membrane	IEA
molecular_function	GO:0000166	nucleotide binding	IEA
molecular_function	GO:0005525	GTP binding	IEA

Pathways (from Reactome)

Pathway description

No match

Phenotype (from MGI, Zfin or HPO)

Phenotype

Definition

Genetic BG

No match

Interacting proteins (from Reactome)

Interactor ID

Name

Interaction type

No match

0 s.

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		© Olivier Tassy / Olivier Pourquie 2007-2024 contact: otassy@igbmc.fr