Manteia

ENSDARG00000056794

Danio rerio

Features

Gene ID:	ENSDARG00000056794

Biological name :	ARL3 (1 of many)

Synonyms :	ARL3 (1 of many) / zgc:110197

Possible biological names infered from orthology :	ADP ribosylation factor like GTPase 3 / ADP-ribosylation factor-like protein 3 / ARL3 / P36405 / Q9WUL7

Species:	Danio rerio

Chr. number:	13
Strand:	-1
Band:
Gene start:	11963789
Gene end:	11971161

Corresponding Affymetrix probe sets:

Cross references:	Ensembl peptide - ENSDARP00000151866 Ensembl peptide - ENSDARP00000066229 Ensembl peptide - ENSDARP00000133017 NCBI entrez gene - 550525 See in Manteia. RefSeq - NM_001328421 RefSeq - NM_001017827 RefSeq - XM_009307160 RefSeq Peptide - NP_001017827 RefSeq Peptide - NP_001315350 swissprot - Q568N2 swissprot - E7F7G0 ZFIN ID - ZDB-GENE-050417-368 Ensembl - ENSDARG00000056794

See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed

Ortholog prediction (from Ensembl)

Ortholog name	ID	Species
ARL3	ENSGALG00000008049	Gallus gallus
ARL3	ENSG00000138175	Homo sapiens
Arl3	ENSMUSG00000025035	Mus musculus

Paralog prediction (from Ensembl)

Paralog name	ID	Similarity(%)
arl3 / Q1MTE5 / ADP-ribosylation factor-like 3 / P36405* / Q9WUL7* / ADP ribosylation factor like GTPase 3* / ADP-ribosylation factor-like protein 3 *	ENSDARG00000071409	95
arl3l2 / ADP-ribosylation factor-like 3, like 2	ENSDARG00000015404	76
arl3l1 / ADP-ribosylation factor-like 3, like 1	ENSDARG00000111106	75
arl2 / ADP-ribosylation factor-like 2 / Q9D0J4* / P36404* / ARL2-SNX15* / ADP ribosylation factor like GTPase 2* / ARL2-SNX15 readthrough (NMD candidate)* / ADP-ribosylation factor-like protein 2 *	ENSDARG00000069496	52
arf2b / ADP-ribosylation factor 2b / Arf2* / Q8BSL7* / ADP-ribosylation factor 2 *	ENSDARG00000016393	45
arf3b / ADP-ribosylation factor 3b	ENSDARG00000036998	45
arf2a / ADP-ribosylation factor 2a	ENSDARG00000014763	45
arf3a / ADP-ribosylation factor 3a / ARF3* / P61204* / P61205* / ADP ribosylation factor 3*	ENSDARG00000070539	45
arf1 / ADP-ribosylation factor 1	ENSDARG00000009484	44
arf6a / ADP-ribosylation factor 6a / ARF6* / P62330* / ADP ribosylation factor 6*	ENSDARG00000101626	43
arl14 / ADP-ribosylation factor-like 14 / Q8N4G2* / ADP ribosylation factor like GTPase 14*	ENSDARG00000063223	43
arf6b / ADP-ribosylation factor 6b / ARF6* / P62330* / P62331* / ADP ribosylation factor 6*	ENSDARG00000052928	43
arf4a / ADP-ribosylation factor 4a / ARF5* / P84084* / P84085* / ADP ribosylation factor 5*	ENSDARG00000045989	43
arf5 / ADP-ribosylation factor 5 / P84085*	ENSDARG00000070472	42
zgc:77650 / ARF5* / P84084* / P84085* / ADP ribosylation factor 5*	ENSDARG00000113899	42
arf4b / ADP-ribosylation factor 4b	ENSDARG00000100339	40
trim23 / tripartite motif containing 23 / P36406* / Q8BGX0* / E3 ubiquitin-protein ligase TRIM23 *	ENSDARG00000069420	40
si:ch1073-165f9.2	ENSDARG00000073876	39
zgc:110286	ENSDARG00000074210	36
arl11 / ADP-ribosylation factor-like 11 / Q6P3A9* / Q969Q4* / ADP ribosylation factor like GTPase 11* / ADP-ribosylation factor-like protein 11 *	ENSDARG00000036637	34

Protein motifs (from Interpro)

Interpro ID	Name
IPR005225	Small GTP-binding protein domain
IPR006689	Small GTPase superfamily, ARF/SAR type
IPR024156	Small GTPase superfamily, ARF type
IPR027417	P-loop containing nucleoside triphosphate hydrolase

Gene Ontology (GO)

Type	GO ID	Term	Ev.Code
cellular_component	GO:0005622	intracellular	IEA
molecular_function	GO:0000166	nucleotide binding	IEA
molecular_function	GO:0005525	GTP binding	IEA

Pathways (from Reactome)

Pathway description

Trafficking of myristoylated proteins to the cilium

Phenotype (from MGI, Zfin or HPO)

Phenotype

Definition

Genetic BG

No match

Interacting proteins (from Reactome)

Interactor ID	Name	Interaction type
ENSDARG00000009629	Q90Z08 / unc119.1 / unc-119 homolog 1 / A6NIH7* / Q8C4B4* / UNC119B* / unc-119 lipid binding chaperone B*	/ complex / reaction
ENSDARG00000078261	nphp3 / P0CI65 / nephronophthisis 3 / Q7Z494* / Q7TNH6* / Gm28305* / NPHP3-ACAD11* / nephrocystin 3* / NPHP3-ACAD11 readthrough (NMD candidate)*	/ complex / reaction
ENSDARG00000044339	rp2 / F1QC45 / RP2, ARL3 GTPase activating protein / O75695* / Q9EPK2* / Protein XRP2 *	/ complex / reaction

0 s.

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		© Olivier Tassy / Olivier Pourquie 2007-2024 contact: otassy@igbmc.fr