ENSDARG00000045989


Danio rerio

Features
Gene ID: ENSDARG00000045989
  
Biological name :arf4a
  
Synonyms : ADP-ribosylation factor 4a / arf4a
  
Possible biological names infered from orthology : ADP ribosylation factor 5 / ARF5 / P84084 / P84085
  
Species: Danio rerio
  
Chr. number: 11
Strand: 1
Band:
Gene start: 42494531
Gene end: 42502940
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000067603
NCBI entrez gene - 445196     See in Manteia.
swissprot - Q6DC20
ZFIN ID - ZDB-GENE-040801-109
Ensembl - ENSDARG00000045989
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ARF5ENSGALG00000043476Gallus gallus
 ARF5ENSG00000004059Homo sapiens
 Arf5ENSMUSG00000020440Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
zgc:77650 / ARF5* / P84084* / P84085* / ADP ribosylation factor 5*ENSDARG0000011389993
arf5 / ADP-ribosylation factor 5 / P84085*ENSDARG0000007047293
arf2b / ADP-ribosylation factor 2b / Arf2* / Q8BSL7* / ADP-ribosylation factor 2 *ENSDARG0000001639382
arf2a / ADP-ribosylation factor 2aENSDARG0000001476382
arf1 / ADP-ribosylation factor 1ENSDARG0000000948481
arf3a / ADP-ribosylation factor 3a / ARF3* / P61204* / P61205* / ADP ribosylation factor 3*ENSDARG0000007053981
arf3b / ADP-ribosylation factor 3bENSDARG0000003699880
arf4b / ADP-ribosylation factor 4bENSDARG0000010033974
zgc:110286ENSDARG0000007421072
si:ch1073-165f9.2ENSDARG0000007387671
arf6b / ADP-ribosylation factor 6b / ARF6* / P62330* / P62331* / ADP ribosylation factor 6*ENSDARG0000005292865
arf6a / ADP-ribosylation factor 6a / ARF6* / P62330* / ADP ribosylation factor 6*ENSDARG0000010162665
trim23 / tripartite motif containing 23 / P36406* / Q8BGX0* / E3 ubiquitin-protein ligase TRIM23 *ENSDARG0000006942058
arl2 / ADP-ribosylation factor-like 2 / Q9D0J4* / P36404* / ARL2-SNX15* / ADP ribosylation factor like GTPase 2* / ARL2-SNX15 readthrough (NMD candidate)* / ADP-ribosylation factor-like protein 2 *ENSDARG0000006949644
arl3 / Q1MTE5 / ADP-ribosylation factor-like 3 / P36405* / Q9WUL7* / ADP ribosylation factor like GTPase 3* / ADP-ribosylation factor-like protein 3 *ENSDARG0000007140943
arl3l1 / ADP-ribosylation factor-like 3, like 1ENSDARG0000011110643
zgc:110197 / ARL3 (1 of many) / ARL3* / P36405* / Q9WUL7* / ADP ribosylation factor like GTPase 3* / ADP-ribosylation factor-like protein 3 *ENSDARG0000005679443
arl3l2 / ADP-ribosylation factor-like 3, like 2ENSDARG0000001540443
arl14 / ADP-ribosylation factor-like 14 / Q8N4G2* / ADP ribosylation factor like GTPase 14*ENSDARG0000006322342
arl11 / ADP-ribosylation factor-like 11 / Q6P3A9* / Q969Q4* / ADP ribosylation factor like GTPase 11* / ADP-ribosylation factor-like protein 11 *ENSDARG0000003663742


Protein motifs (from Interpro)
Interpro ID Name
 IPR005225  Small GTP-binding protein domain
 IPR006689  Small GTPase superfamily, ARF/SAR type
 IPR024156  Small GTPase superfamily, ARF type
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005622 intracellular IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0005525 GTP binding IEA


Pathways (from Reactome)
Pathway description
COPI-mediated anterograde transport
COPI-dependent Golgi-to-ER retrograde traffic


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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