ENSMUSG00000020440


Mus musculus

Features
Gene ID: ENSMUSG00000020440
  
Biological name :Arf5
  
Synonyms : ADP-ribosylation factor 5 / Arf5 / P84084
  
Possible biological names infered from orthology : P84085
  
Species: Mus musculus
  
Chr. number: 6
Strand: 1
Band: A3.3
Gene start: 28423560
Gene end: 28426602
  
Corresponding Affymetrix probe sets: 10536746 (MoGene1.0st)   1422807_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000020717
Ensembl peptide - ENSMUSP00000127281
NCBI entrez gene - 11844     See in Manteia.
MGI - MGI:99434
RefSeq - NM_007480
RefSeq Peptide - NP_031506
swissprot - P84084
Ensembl - ENSMUSG00000020440
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 arf4aENSDARG00000103858Danio rerio
 arf4aENSDARG00000045989Danio rerio
 arf5ENSDARG00000070472Danio rerio
 zgc:77650ENSDARG00000113899Danio rerio
 ARF5ENSGALG00000043476Gallus gallus
 ARF5ENSG00000004059Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Arf4 / P61750 / ADP-ribosylation factor 4 / P18085*ENSMUSG0000002187790
Arf1 / P84078 / ADP-ribosylation factor 1 ENSMUSG0000004807681
Arf2 / Q8BSL7 / ADP-ribosylation factor 2 ENSMUSG0000006242180
Arf3 / P61205 / ADP-ribosylation factor 3 / P61204*ENSMUSG0000005185379
Arf6 / P62331 / ADP-ribosylation factor 6 / P62330*ENSMUSG0000004414763
Q8BGX0 / Trim23 / E3 ubiquitin-protein ligase TRIM23 / P36406* / tripartite motif containing 23*ENSMUSG0000002171256
Arl2 / Q9D0J4 / ADP-ribosylation factor-like protein 2 / P36404* / ARL2-SNX15* / ADP ribosylation factor like GTPase 2* / ARL2-SNX15 readthrough (NMD candidate)*ENSMUSG0000002494447
Arl14 / ADP ribosylation factor like GTPase 14 / Q8N4G2*ENSMUSG0000009820743
Arl3 / Q9WUL7 / ADP-ribosylation factor-like protein 3 / P36405* / ADP ribosylation factor like GTPase 3*ENSMUSG0000002503543
Arl11 / Q6P3A9 / ADP-ribosylation factor-like protein 11 / Q969Q4* / ADP ribosylation factor like GTPase 11*ENSMUSG0000004315740
Arl15 / Q8BGR6 / ADP-ribosylation factor-like protein 15 / Q9NXU5* / ADP ribosylation factor like GTPase 15*ENSMUSG0000004234831
Arl8b / Q9CQW2 / ADP-ribosylation factor-like protein 8B / Q9NVJ2* / ADP ribosylation factor like GTPase 8B*ENSMUSG0000003010531
Arl8a / Q8VEH3 / ADP-ribosylation factor-like protein 8A / Q96BM9* / ADP ribosylation factor like GTPase 8A*ENSMUSG0000002642629


Protein motifs (from Interpro)
Interpro ID Name
 IPR005225  Small GTP-binding protein domain
 IPR006689  Small GTPase superfamily, ARF/SAR type
 IPR024156  Small GTPase superfamily, ARF type
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006890 retrograde vesicle-mediated transport, Golgi to ER ISO
 biological_processGO:0015031 protein transport TAS
 biological_processGO:0016192 vesicle-mediated transport IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0005886 plasma membrane IDA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0048471 perinuclear region of cytoplasm IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0005525 GTP binding TAS


Pathways (from Reactome)
Pathway description
COPI-mediated anterograde transport
COPI-dependent Golgi-to-ER retrograde traffic


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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