ENSMUSG00000062421


Mus musculus

Features
Gene ID: ENSMUSG00000062421
  
Biological name :Arf2
  
Synonyms : ADP-ribosylation factor 2 / Arf2 / Q8BSL7
  
Possible biological names infered from orthology :
  
Species: Mus musculus
  
Chr. number: 11
Strand: 1
Band: E1
Gene start: 103966739
Gene end: 103985337
  
Corresponding Affymetrix probe sets: 10381744 (MoGene1.0st)   1416458_at (Mouse Genome 430 2.0 Array)   1416459_at (Mouse Genome 430 2.0 Array)   1438661_a_at (Mouse Genome 430 2.0 Array)   1456473_x_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000120473
Ensembl peptide - ENSMUSP00000051814
Ensembl peptide - ENSMUSP00000102622
NCBI entrez gene - 11841     See in Manteia.
MGI - MGI:99595
RefSeq - NM_001304574
RefSeq - NM_007477
RefSeq Peptide - NP_001291503
RefSeq Peptide - NP_031503
swissprot - A2A6T9
swissprot - Q8BSL7
Ensembl - ENSMUSG00000062421
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 arf2bENSDARG00000016393Danio rerio


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Arf1 / P84078 / ADP-ribosylation factor 1 ENSMUSG0000004807696
Arf3 / P61205 / ADP-ribosylation factor 3 / P61204*ENSMUSG0000005185394
Arf4 / P61750 / ADP-ribosylation factor 4 / P18085*ENSMUSG0000002187780
Arf5 / P84084 / ADP-ribosylation factor 5 / P84085*ENSMUSG0000002044080
Arf6 / P62331 / ADP-ribosylation factor 6 / P62330*ENSMUSG0000004414768
Q8BGX0 / Trim23 / E3 ubiquitin-protein ligase TRIM23 / P36406* / tripartite motif containing 23*ENSMUSG0000002171259
Arl2 / Q9D0J4 / ADP-ribosylation factor-like protein 2 / P36404* / ARL2-SNX15* / ADP ribosylation factor like GTPase 2* / ARL2-SNX15 readthrough (NMD candidate)*ENSMUSG0000002494446
Arl3 / Q9WUL7 / ADP-ribosylation factor-like protein 3 / P36405* / ADP ribosylation factor like GTPase 3*ENSMUSG0000002503545
Arl14 / ADP ribosylation factor like GTPase 14 / Q8N4G2*ENSMUSG0000009820743
Arl11 / Q6P3A9 / ADP-ribosylation factor-like protein 11 / Q969Q4* / ADP ribosylation factor like GTPase 11*ENSMUSG0000004315741
Arl8b / Q9CQW2 / ADP-ribosylation factor-like protein 8B / Q9NVJ2* / ADP ribosylation factor like GTPase 8B*ENSMUSG0000003010534
Arl8a / Q8VEH3 / ADP-ribosylation factor-like protein 8A / Q96BM9* / ADP ribosylation factor like GTPase 8A*ENSMUSG0000002642633
Arl15 / Q8BGR6 / ADP-ribosylation factor-like protein 15 / Q9NXU5* / ADP ribosylation factor like GTPase 15*ENSMUSG0000004234832


Protein motifs (from Interpro)
Interpro ID Name
 IPR005225  Small GTP-binding protein domain
 IPR006689  Small GTPase superfamily, ARF/SAR type
 IPR024156  Small GTPase superfamily, ARF type
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0015031 protein transport TAS
 biological_processGO:0016192 vesicle-mediated transport IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005794 Golgi apparatus IDA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0005525 GTP binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0002075 abnormal coat color "irregular or unusual pigmentation pattern of the hair in relation to control animals" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
Show

Allelic Composition: Apptm1b(KOMP)Wtsi/App+
Genetic Background: C57BL/6N-Apptm1b(KOMP)Wtsi/Ics

 MP:0002608 increased hematocrit "greater than average percentage of a volume of a blood sample occupied by red blood cells" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator, Stedman s Medical Dictionary , 27th edition:ISBN 0-683-40008-8]
Show

Allelic Composition: Apptm1b(KOMP)Wtsi/App+
Genetic Background: C57BL/6N-Apptm1b(KOMP)Wtsi/Ics

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr