ENSDARG00000009480


Danio rerio

Features
Gene ID: ENSDARG00000009480
  
Biological name :pdcl
  
Synonyms : pdcl / phosducin-like
  
Possible biological names infered from orthology : Phosducin-like protein / Q13371 / Q9DBX2
  
Species: Danio rerio
  
Chr. number: 16
Strand: -1
Band:
Gene start: 51950510
Gene end: 51966846
  
Corresponding Affymetrix probe sets: Dr.18716.1.A1_at (Zebrafish Array)   NM_199647_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000128225
NCBI entrez gene - 323645     See in Manteia.
RefSeq - NM_199647
RefSeq Peptide - NP_955941
swissprot - F1QTL0
ZFIN ID - ZDB-GENE-030131-2365
Ensembl - ENSDARG00000009480
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PDCLENSGALG00000001275Gallus gallus
 PDCLENSG00000136940Homo sapiens
 PdclENSMUSG00000009030Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
pdcb / phosducin b / PDC* / P20941* / Q9QW08* / phosducin*ENSDARG0000001763431
pdca / phosducin a / PDC* / P20941* / Q9QW08* / phosducin*ENSDARG0000001188630


Protein motifs (from Interpro)
Interpro ID Name
 IPR001200  Phosducin
 IPR012336  Thioredoxin-like fold
 IPR023196  Phosducin, N-terminal domain superfamily
 IPR024253  Phosducin, thioredoxin-like domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
Cooperation of PDCL (PhLP1) and TRiC/CCT in G-protein beta folding


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000002696 gnb3b / guanine nucleotide binding protein (G protein), beta polypeptide 3b / GNB3* / Q61011* / P16520* / G protein subunit beta 3* / guanine nucleotide binding protein (G protein), beta 3*  / complex
 ENSDARG00000004358 gnb3a / guanine nucleotide binding protein (G protein), beta polypeptide 3a / GNB3* / Q61011* / P16520* / G protein subunit beta 3* / guanine nucleotide binding protein (G protein), beta 3*  / complex
 ENSDARG00000035357 gnb2 / guanine nucleotide binding protein (G protein), beta polypeptide 2 / P62880* / P62879* / G protein subunit beta 2* / guanine nucleotide binding protein (G protein), beta 2*  / complex
 ENSDARG00000056831 gng2 / guanine nucleotide binding protein (G protein), gamma 2 / P59768* / P63213* / G protein subunit gamma 2*  / reaction / complex
 ENSDARG00000090454 gnb1a / Q6PH57 / guanine nucleotide binding protein (G protein), beta polypeptide 1a / GNB1* / P62873* / G protein subunit beta 1*  / complex
 ENSDARG00000099685 gnb5a / A1L271 / guanine nucleotide binding protein (G protein), beta 5a / GNB5* / P62881* / O14775* / G protein subunit beta 5* / guanine nucleotide binding protein (G protein), beta 5*  / complex
 ENSDARG00000115383 gnb4b / guanine nucleotide binding protein (G protein), beta polypeptide 4b / GNB4* / Q9HAV0* / G protein subunit beta 4*  / complex
 ENSDARG00000104372 gnb1b / guanine nucleotide binding protein (G protein), beta polypeptide 1b / GNB1* / P62874* / P62873* / G protein subunit beta 1* / guanine nucleotide binding protein (G protein), beta 1*  / complex
 ENSDARG00000055377 gnb5b / Q6PBY0 / guanine nucleotide binding protein (G protein), beta 5b / GNB5* / O14775* / P62881* / G protein subunit beta 5* / guanine nucleotide binding protein (G protein), beta 5*  / complex






 

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