ENSDARG00000013708


Danio rerio

Features
Gene ID: ENSDARG00000013708
  
Biological name :usp9
  
Synonyms : ubiquitin specific peptidase 9 / usp9
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 9
Strand: 1
Band:
Gene start: 33261330
Gene end: 33321040
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000026588
Ensembl peptide - ENSDARP00000115664
NCBI entrez gene - 568683     See in Manteia.
RefSeq - XM_009304756
RefSeq - XM_009304757
RefSeq - NM_001077449
RefSeq Peptide - NP_001070917
swissprot - Q4FE55
swissprot - F6NXT7
ZFIN ID - ZDB-GENE-061019-1
Ensembl - ENSDARG00000013708
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
usp24 / ubiquitin specific peptidase 24ENSDARG0000005992517
USP34 / ubiquitin specific peptidase 34 / Q70CQ2*ENSDARG0000010225216
usp47 / ubiquitin specific peptidase 47 / Q96K76*ENSDARG000001026457
usp7 / ubiquitin specific peptidase 7 (herpes virus-associated) / Q93009* / ubiquitin specific peptidase 7*ENSDARG000000737107
usp40 / ubiquitin specific peptidase 40 / Q8BWR4* / Q9NVE5*ENSDARG000000711976
usp48 / ubiquitin specific peptidase 48 / Q3V0C5* / Q86UV5*ENSDARG000000903016
si:ch211-212k18.13ENSDARG000001056144
usp18 / ubiquitin specific peptidase 18 / USP41* / Q9WTV6* / Q9UMW8* / Q3LFD5* / ubiquitin specific peptidase 41*ENSDARG000000880783


Protein motifs (from Interpro)
Interpro ID Name
 IPR001394  Peptidase C19, ubiquitin carboxyl-terminal hydrolase
 IPR011989  Armadillo-like helical
 IPR016024  Armadillo-type fold
 IPR018200  Ubiquitin specific protease, conserved site
 IPR028889  Ubiquitin specific protease domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006508 proteolysis IEA
 biological_processGO:0006511 ubiquitin-dependent protein catabolic process IEA
 biological_processGO:0016579 protein deubiquitination IEA
 molecular_functionGO:0008233 peptidase activity IEA
 molecular_functionGO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0001094 whole organism whole organism decreased amount , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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