ENSDARG00000105614


Danio rerio

Features
Gene ID: ENSDARG00000105614
  
Biological name :si:ch211-212k18.13
  
Synonyms : si:ch211-212k18.13
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 7
Strand: -1
Band:
Gene start: 19605830
Gene end: 19613388
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000142721
NCBI entrez gene - 794291     See in Manteia.
swissprot - A0A1D5NSA9
ZFIN ID - ZDB-GENE-160728-93
Ensembl - ENSDARG00000105614
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
usp47 / ubiquitin specific peptidase 47 / Q96K76*ENSDARG0000010264527
usp40 / ubiquitin specific peptidase 40 / Q8BWR4* / Q9NVE5*ENSDARG0000007119723
usp48 / ubiquitin specific peptidase 48 / Q3V0C5* / Q86UV5*ENSDARG0000009030119
usp9 / ubiquitin specific peptidase 9ENSDARG0000001370819
usp7 / ubiquitin specific peptidase 7 (herpes virus-associated) / Q93009* / ubiquitin specific peptidase 7*ENSDARG0000007371018
USP34 / ubiquitin specific peptidase 34 / Q70CQ2*ENSDARG0000010225216
usp18 / ubiquitin specific peptidase 18 / USP41* / Q9WTV6* / Q9UMW8* / Q3LFD5* / ubiquitin specific peptidase 41*ENSDARG0000008807815
usp24 / ubiquitin specific peptidase 24ENSDARG000000599251


Protein motifs (from Interpro)
Interpro ID Name
 IPR001394  Peptidase C19, ubiquitin carboxyl-terminal hydrolase
 IPR006703  AIG1-type guanine nucleotide-binding (G) domain
 IPR018200  Ubiquitin specific protease, conserved site
 IPR027417  P-loop containing nucleoside triphosphate hydrolase
 IPR028889  Ubiquitin specific protease domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006511 ubiquitin-dependent protein catabolic process IEA
 biological_processGO:0016579 protein deubiquitination IEA
 molecular_functionGO:0005525 GTP binding IEA
 molecular_functionGO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr