ENSDARG00000014181


Danio rerio

Features
Gene ID: ENSDARG00000014181
  
Biological name :foxp1b
  
Synonyms : forkhead box P1b / foxp1b
  
Possible biological names infered from orthology : Foxp1 / Mus musculus forkhead box P1 (Foxp1), transcript variant 4, mRNA. / P58462
  
Species: Danio rerio
  
Chr. number: 6
Strand: -1
Band:
Gene start: 43602143
Gene end: 43890462
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000136335
Ensembl peptide - ENSDARP00000156823
Ensembl peptide - ENSDARP00000154863
Ensembl peptide - ENSDARP00000064937
Ensembl peptide - ENSDARP00000109350
Ensembl peptide - ENSDARP00000123863
Ensembl peptide - ENSDARP00000124020
NCBI entrez gene - 569047     See in Manteia.
RefSeq - NM_001039637
RefSeq Peptide - NP_001034726
swissprot - F8W3V4
swissprot - E7EZ68
swissprot - F8W4P7
swissprot - B3DJD6
ZFIN ID - ZDB-GENE-041203-1
Ensembl - ENSDARG00000014181
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 FOXP1ENSGALG00000007769Gallus gallus
 Foxp1ENSMUSG00000030067Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
foxp2 / forkhead box P2ENSDARG0000000545363
foxp1a / forkhead box P1aENSDARG0000000484361
foxp4 / forkhead box P4ENSDARG0000007612056
foxp3a / forkhead box P3a / FOXP3* / Q99JB6* / Q9BZS1* / forkhead box P3* / Forkhead box protein P3 Forkhead box protein P3, C-terminally processed Forkhead box protein P3 41 kDa form*ENSDARG0000005575023
foxp3b / forkhead box P3b / FOXP3* / Q99JB6* / Q9BZS1* / forkhead box P3* / Forkhead box protein P3 Forkhead box protein P3, C-terminally processed Forkhead box protein P3 41 kDa form*ENSDARG0000007827921
foxd3 / forkhead box D3 / FOXD4* / Q9UJU5* / Q12950* / Q3SYB3* / Q5VV16* / Q60688* / Q6VB84* / Q8WXT5* / Q9NU39* / FOXD4L3* / FOXD4L4* / FOXD4L5* / FOXD4L6* / FOXD4L1* / forkhead box D4* / ...ENSDARG0000002103210
foxg1b / forkhead box G1bENSDARG0000003270510
foxg1c / forkhead box G1cENSDARG000000683809
foxe3 / forkhead box E3 / FOXE1* / O00358* / Q13461* / Q8R2I0* / Q9QY14* / forkhead box E1* / Forkhead box protein E1 * / Forkhead box protein E3 *ENSDARG000000628929
foxd1 / forkhead box D1 / FOXD2* / Q61345* / O35392* / O60548* / Q16676* / forkhead box D2* / Forkhead box protein D2 * / Forkhead box protein D1 *ENSDARG000000291799
foxf2b / forkhead box F2b / FOXF2* / O54743* / Q12947* / forkhead box F2* / Forkhead box protein F2 *ENSDARG000000703899
foxf2a / forkhead box F2a / FOXF2* / O54743* / Q12947* / forkhead box F2* / Forkhead box protein F2 *ENSDARG000000171959
foxd2 / forkhead box D2 / FOXD1* / O35392* / O60548* / Q16676* / Q61345* / forkhead box D1* / Forkhead box protein D1 * / Forkhead box protein D2 *ENSDARG000000581339
foxg1d / forkhead box G1dENSDARG000000700539
foxg1a / forkhead box G1a / FOXG1* / P55316* / Q60987* / Gm43517* / forkhead box G1* / Forkhead box protein G1 *ENSDARG000000707699
foxe1 / forkhead box E1 / FOXE3* / Q9QY14* / O00358* / Q13461* / Q8R2I0* / forkhead box E3* / Forkhead box protein E3 * / Forkhead box protein E1 *ENSDARG000000792668
foxd5 / forkhead box D5 / FOXD1* / FOXD2* / Q16676* / Q61345* / O35392* / O60548* / forkhead box D2* / forkhead box D1* / Forkhead box protein D1 * / Forkhead box protein D2 *ENSDARG000000424858
foxq1b / forkhead box Q1b / FOXQ1* / O70220* / Q9C009* / forkhead box Q1* / Forkhead box protein Q1 *ENSDARG000000553958
foxq1a / forkhead box Q1a / FOXQ1* / O70220* / Q9C009* / forkhead box Q1* / Forkhead box protein Q1 *ENSDARG000000308968
zgc:162612 / FOXD1* / FOXD2* / O60548* / Q61345* / Q16676* / O35392* / forkhead box D1* / forkhead box D2* / Forkhead box protein D1 * / Forkhead box protein D2 *ENSDARG000000796998


Protein motifs (from Interpro)
Interpro ID Name
 IPR001766  Fork head domain
 IPR011991  ArsR-like helix-turn-helix domain
 IPR013087  Zinc finger C2H2-type
 IPR030456  Fork head domain conserved site 2
 IPR032354  FOXP, coiled-coil domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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