Manteia

ENSDARG00000070389

Danio rerio

Features

Gene ID:	ENSDARG00000070389

Biological name :	foxf2b

Synonyms :	forkhead box F2b / foxf2b

Possible biological names infered from orthology :	forkhead box F2 / Forkhead box protein F2 / FOXF2 / O54743 / Q12947

Species:	Danio rerio

Chr. number:	20
Strand:	1
Band:
Gene start:	26690036
Gene end:	26692944

Corresponding Affymetrix probe sets:

Cross references:	Ensembl peptide - ENSDARP00000094009 NCBI entrez gene - 100002904 See in Manteia. RefSeq - XM_003200706 swissprot - E7FER3 ZFIN ID - ZDB-GENE-041001-130 Ensembl - ENSDARG00000070389

See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed

Ortholog prediction (from Ensembl)

Ortholog name	ID	Species
FOXF2	ENSGALG00000031920	Gallus gallus
FOXF2	ENSG00000137273	Homo sapiens
Foxf2	ENSMUSG00000038402	Mus musculus

Paralog prediction (from Ensembl)

Paralog name	ID	Similarity(%)
foxf2a / forkhead box F2a / FOXF2* / O54743* / Q12947* / forkhead box F2* / Forkhead box protein F2 *	ENSDARG00000017195	57
foxf1 / A1L1S5 / forkhead box F1 / Q61080* / Q12946* / Forkhead box protein F1 *	ENSDARG00000015399	45
foxd1 / forkhead box D1 / FOXD2* / Q61345* / O35392* / O60548* / Q16676* / forkhead box D2* / Forkhead box protein D2 * / Forkhead box protein D1 *	ENSDARG00000029179	21
foxe3 / forkhead box E3 / FOXE1* / O00358* / Q13461* / Q8R2I0* / Q9QY14* / forkhead box E1* / Forkhead box protein E1 * / Forkhead box protein E3 *	ENSDARG00000062892	20
foxd2 / forkhead box D2 / FOXD1* / O35392* / O60548* / Q16676* / Q61345* / forkhead box D1* / Forkhead box protein D1 * / Forkhead box protein D2 *	ENSDARG00000058133	20
foxq1b / forkhead box Q1b / FOXQ1* / O70220* / Q9C009* / forkhead box Q1* / Forkhead box protein Q1 *	ENSDARG00000055395	19
foxd3 / forkhead box D3 / FOXD4* / Q9UJU5* / Q12950* / Q3SYB3* / Q5VV16* / Q60688* / Q6VB84* / Q8WXT5* / Q9NU39* / FOXD4L3* / FOXD4L4* / FOXD4L5* / FOXD4L6* / FOXD4L1* / forkhead box D4* / ...	ENSDARG00000021032	19
foxg1a / forkhead box G1a / FOXG1* / P55316* / Q60987* / Gm43517* / forkhead box G1* / Forkhead box protein G1 *	ENSDARG00000070769	18
foxe1 / forkhead box E1 / FOXE3* / Q9QY14* / O00358* / Q13461* / Q8R2I0* / forkhead box E3* / Forkhead box protein E3 * / Forkhead box protein E1 *	ENSDARG00000079266	18
foxg1c / forkhead box G1c	ENSDARG00000068380	17
foxq1a / forkhead box Q1a / FOXQ1* / O70220* / Q9C009* / forkhead box Q1* / Forkhead box protein Q1 *	ENSDARG00000030896	17
foxg1b / forkhead box G1b	ENSDARG00000032705	17
zgc:162612 / FOXD1* / FOXD2* / O60548* / Q61345* / Q16676* / O35392* / forkhead box D1* / forkhead box D2* / Forkhead box protein D1 * / Forkhead box protein D2 *	ENSDARG00000079699	17
foxd5 / forkhead box D5 / FOXD1* / FOXD2* / Q16676* / Q61345* / O35392* / O60548* / forkhead box D2* / forkhead box D1* / Forkhead box protein D1 * / Forkhead box protein D2 *	ENSDARG00000042485	17
foxh1 / forkhead box H1 / O75593* / O88621* / Forkhead box protein H1 *	ENSDARG00000055630	17
foxg1d / forkhead box G1d	ENSDARG00000070053	16
foxp2 / forkhead box P2	ENSDARG00000005453	14
si:dkey-7e14.3 / Gm5294* / AC187653.1*	ENSDARG00000086055	14
foxp1a / forkhead box P1a	ENSDARG00000004843	14
foxq2 / forkhead box Q2	ENSDARG00000071394	14

Protein motifs (from Interpro)

Interpro ID	Name
IPR001766	Fork head domain
IPR011991	ArsR-like helix-turn-helix domain
IPR018122	Fork head domain conserved site1
IPR030456	Fork head domain conserved site 2

Gene Ontology (GO)

Type	GO ID	Term	Ev.Code
biological_process	GO:0006355	regulation of transcription, DNA-templated	IEA
biological_process	GO:0006357	regulation of transcription by RNA polymerase II	IEA
biological_process	GO:0009653	anatomical structure morphogenesis	IBA
biological_process	GO:0097084	vascular smooth muscle cell development	IMP
biological_process	GO:1904238	pericyte cell differentiation	IMP
cellular_component	GO:0005634	nucleus	IEA
molecular_function	GO:0003677	DNA binding	IEA
molecular_function	GO:0003700	DNA-binding transcription factor activity	IEA
molecular_function	GO:0003705	transcription factor activity, RNA polymerase II distal enhancer sequence-specific binding	IBA
molecular_function	GO:0043565	sequence-specific DNA binding	IEA

Pathways (from Reactome)

Pathway description

No match

Phenotype (from MGI, Zfin or HPO)

ID	Phenotype	Definition	Genetic BG
ZFA:0000099	brain vasculature	brain vasculature pericyte decreased amount , abnormal brain vasculature vascular smooth muscle decreased amount , abnormal brain vasculature vascular smooth muscle decreased branchiness , abnormal	Show
ZFA:0009112	pericyte	pericyte cell development decreased occurrence , abnormal	Show

Interacting proteins (from Reactome)

Interactor ID

Name

Interaction type

No match

0 s.

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		© Olivier Tassy / Olivier Pourquie 2007-2024 contact: otassy@igbmc.fr