ENSDARG00000076120


Danio rerio

Features
Gene ID: ENSDARG00000076120
  
Biological name :foxp4
  
Synonyms : forkhead box P4 / foxp4
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 11
Strand: 1
Band:
Gene start: 21910343
Gene end: 22094392
  
Corresponding Affymetrix probe sets: Dr.25615.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000100156
Ensembl peptide - ENSDARP00000130981
NCBI entrez gene - 557245     See in Manteia.
RefSeq - XM_009305996
RefSeq - XM_021479628
RefSeq Peptide - NP_001186420
swissprot - B3DJK9
swissprot - A0A0R4IE21
ZFIN ID - ZDB-GENE-101207-1
Ensembl - ENSDARG00000076120
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
foxp2 / forkhead box P2ENSDARG0000000545360
foxp1b / forkhead box P1b / Foxp1* / P58462* / Mus musculus forkhead box P1 (Foxp1), transcript variant 4, mRNA.*ENSDARG0000001418153
foxp1a / forkhead box P1aENSDARG0000000484347
foxp3a / forkhead box P3a / FOXP3* / Q99JB6* / Q9BZS1* / forkhead box P3* / Forkhead box protein P3 Forkhead box protein P3, C-terminally processed Forkhead box protein P3 41 kDa form*ENSDARG0000005575021
foxp3b / forkhead box P3b / FOXP3* / Q99JB6* / Q9BZS1* / forkhead box P3* / Forkhead box protein P3 Forkhead box protein P3, C-terminally processed Forkhead box protein P3 41 kDa form*ENSDARG0000007827919
foxd3 / forkhead box D3 / FOXD4* / Q9UJU5* / Q12950* / Q3SYB3* / Q5VV16* / Q60688* / Q6VB84* / Q8WXT5* / Q9NU39* / FOXD4L3* / FOXD4L4* / FOXD4L5* / FOXD4L6* / FOXD4L1* / forkhead box D4* / ...ENSDARG0000002103210
foxg1b / forkhead box G1bENSDARG000000327059
foxd1 / forkhead box D1 / FOXD2* / Q61345* / O35392* / O60548* / Q16676* / forkhead box D2* / Forkhead box protein D2 * / Forkhead box protein D1 *ENSDARG000000291799
foxg1a / forkhead box G1a / FOXG1* / P55316* / Q60987* / Gm43517* / forkhead box G1* / Forkhead box protein G1 *ENSDARG000000707699
foxe3 / forkhead box E3 / FOXE1* / O00358* / Q13461* / Q8R2I0* / Q9QY14* / forkhead box E1* / Forkhead box protein E1 * / Forkhead box protein E3 *ENSDARG000000628928
foxd2 / forkhead box D2 / FOXD1* / O35392* / O60548* / Q16676* / Q61345* / forkhead box D1* / Forkhead box protein D1 * / Forkhead box protein D2 *ENSDARG000000581338
foxf2b / forkhead box F2b / FOXF2* / O54743* / Q12947* / forkhead box F2* / Forkhead box protein F2 *ENSDARG000000703898
foxg1c / forkhead box G1cENSDARG000000683808
foxg1d / forkhead box G1dENSDARG000000700538
foxf2a / forkhead box F2a / FOXF2* / O54743* / Q12947* / forkhead box F2* / Forkhead box protein F2 *ENSDARG000000171958
foxf1 / A1L1S5 / forkhead box F1 / Q61080* / Q12946* / Forkhead box protein F1 *ENSDARG000000153997
foxq2 / forkhead box Q2ENSDARG000000713947
foxd5 / forkhead box D5 / FOXD1* / FOXD2* / Q16676* / Q61345* / O35392* / O60548* / forkhead box D2* / forkhead box D1* / Forkhead box protein D1 * / Forkhead box protein D2 *ENSDARG000000424857
foxh1 / forkhead box H1 / O75593* / O88621* / Forkhead box protein H1 *ENSDARG000000556307
foxe1 / forkhead box E1 / FOXE3* / Q9QY14* / O00358* / Q13461* / Q8R2I0* / forkhead box E3* / Forkhead box protein E3 * / Forkhead box protein E1 *ENSDARG000000792667


Protein motifs (from Interpro)
Interpro ID Name
 IPR001766  Fork head domain
 IPR011991  ArsR-like helix-turn-helix domain
 IPR030456  Fork head domain conserved site 2
 IPR032354  FOXP, coiled-coil domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 biological_processGO:0009653 anatomical structure morphogenesis IBA
 biological_processGO:0030154 cell differentiation IBA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding IBA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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