ENSDARG00000016551


Danio rerio

Features
Gene ID: ENSDARG00000016551
  
Biological name :iqsec1b
  
Synonyms : IQ motif and Sec7 domain 1b / iqsec1b
  
Possible biological names infered from orthology : IQ motif and Sec7 domain 1 / IQ motif and SEC7 domain-containing protein 1 / IQSEC1 / Q6DN90 / Q8R0S2
  
Species: Danio rerio
  
Chr. number: 11
Strand: -1
Band:
Gene start: 26704181
Gene end: 27057572
  
Corresponding Affymetrix probe sets: Dr.13455.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000127652
Ensembl peptide - ENSDARP00000043090
NCBI entrez gene - 100148736     See in Manteia.
RefSeq - XM_005169333
swissprot - X1WBR0
swissprot - E7EZE5
ZFIN ID - ZDB-GENE-120813-1
Ensembl - ENSDARG00000016551
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 IQSEC1ENSGALG00000005042Gallus gallus
 IQSEC1ENSG00000144711Homo sapiens
 Iqsec1ENSMUSG00000034312Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
LO017700.1 / IQSEC1* / Q6DN90* / IQ motif and Sec7 domain 1*ENSDARG0000007382258
iqsec2b / IQ motif and Sec7 domain 2b / IQSEC2* / Q5JU85* / IQ motif and Sec7 domain 2*ENSDARG0000007770952
iqsec2a / IQ motif and Sec7 domain 2a / IQSEC2* / Q5JU85* / IQ motif and Sec7 domain 2*ENSDARG0000010212552
iqsec3a / IQ motif and Sec7 domain 3a / Q9UPP2* / IQSEC3* / Q3TES0* / IQ motif and Sec7 domain 3* / IQ motif and SEC7 domain-containing protein 3 *ENSDARG0000009985034
iqsec3b / IQ motif and Sec7 domain 3b / Q9UPP2* / IQSEC3* / Q3TES0* / IQ motif and Sec7 domain 3* / IQ motif and SEC7 domain-containing protein 3 *ENSDARG0000009309130
arfgef2 / ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)ENSDARG0000007470216
arfgef1 / ADP-ribosylation factor guanine nucleotide-exchange factor 1 (brefeldin A-inhibited) / G3X9K3* / Q9Y6D6* / Brefeldin A-inhibited guanine nucleotide-exchange protein 1 * / ADP ribo...ENSDARG0000006347416
cyth1a / cytohesin 1a / CYTH1* / Q15438* / cytohesin 1*ENSDARG0000007674210
cyth4b / cytohesin 4b / CYTH4* / Q80YW0* / Q9UIA0* / cytohesin 4*ENSDARG000001039849
cyth1a / cyth3b / cytohesin 1a / CYTH3* / O43739* / cytohesin 3*ENSDARG000000051599
cyth1b / cytohesin 1b / CYTH1* / Q15438* / Q9QX11* / cytohesin 1*ENSDARG000000214889
cyth3a / cytohesin 3a / CYTH3* / O08967* / O43739* / cytohesin 3*ENSDARG000000078079
cyth4a / cytohesin 4a / CYTH4* / Q80YW0* / Q9UIA0* / cytohesin 4*ENSDARG000000380119
CYTH2 / si:dkey-283b15.4 / P63034* / Q99418* / AC008403.1* / cytohesin 2*ENSDARG000000288009
fbxo8 / F-box protein 8 / Q9NRD0* / Q9QZN3* / F-box only protein 8 *ENSDARG000000074777
si:ch211-189a21.1 / CYTH3* / O08967* / O43739* / cytohesin 3*ENSDARG000000898294


Protein motifs (from Interpro)
Interpro ID Name
 IPR000048  IQ motif, EF-hand binding site
 IPR000904  Sec7 domain
 IPR011993  PH-like domain superfamily
 IPR023394  Sec7, C-terminal domain superfamily
 IPR030737  IQ motif and SEC7 domain-containing protein 1
 IPR033742  IQ motif and SEC7 domain-containing protein, PH domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001525 angiogenesis IMP
 biological_processGO:0001944 vasculature development IGI
 biological_processGO:0001946 lymphangiogenesis IMP
 biological_processGO:0030036 actin cytoskeleton organization IBA
 biological_processGO:0032012 regulation of ARF protein signal transduction IEA
 biological_processGO:0043547 positive regulation of GTPase activity IEA
 molecular_functionGO:0005086 ARF guanyl-nucleotide exchange factor activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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