ENSDARG00000073822


Danio rerio

Features
Gene ID: ENSDARG00000073822
  
Biological name :LO017700.1
  
Synonyms : LO017700.1
  
Possible biological names infered from orthology : IQ motif and Sec7 domain 1 / IQ motif and SEC7 domain-containing protein 1 / IQSEC1 / Q6DN90 / Q8R0S2
  
Species: Danio rerio
  
Chr. number: 23
Strand: 1
Band:
Gene start: 4583747
Gene end: 4677500
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000086776
Ensembl peptide - ENSDARP00000131206
swissprot - A0A0G2KFX5
swissprot - F1QCJ4
Ensembl - ENSDARG00000073822
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 IQSEC1ENSGALG00000005042Gallus gallus
 IQSEC1ENSG00000144711Homo sapiens
 Iqsec1ENSMUSG00000034312Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
iqsec1b / IQ motif and Sec7 domain 1b / Q8R0S2* / IQSEC1* / Q6DN90* / IQ motif and Sec7 domain 1* / IQ motif and SEC7 domain-containing protein 1 *ENSDARG0000001655176
iqsec2b / IQ motif and Sec7 domain 2b / IQSEC2* / Q5JU85* / IQ motif and Sec7 domain 2*ENSDARG0000007770955
iqsec2a / IQ motif and Sec7 domain 2a / IQSEC2* / Q5JU85* / IQ motif and Sec7 domain 2*ENSDARG0000010212554
iqsec3a / IQ motif and Sec7 domain 3a / Q9UPP2* / IQSEC3* / Q3TES0* / IQ motif and Sec7 domain 3* / IQ motif and SEC7 domain-containing protein 3 *ENSDARG0000009985038
iqsec3b / IQ motif and Sec7 domain 3b / Q9UPP2* / IQSEC3* / Q3TES0* / IQ motif and Sec7 domain 3* / IQ motif and SEC7 domain-containing protein 3 *ENSDARG0000009309136
arfgef1 / ADP-ribosylation factor guanine nucleotide-exchange factor 1 (brefeldin A-inhibited) / G3X9K3* / Q9Y6D6* / Brefeldin A-inhibited guanine nucleotide-exchange protein 1 * / ADP ribo...ENSDARG0000006347420
arfgef2 / ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)ENSDARG0000007470219
cyth4b / cytohesin 4b / CYTH4* / Q80YW0* / Q9UIA0* / cytohesin 4*ENSDARG0000010398412
cyth1b / cytohesin 1b / CYTH1* / Q15438* / Q9QX11* / cytohesin 1*ENSDARG0000002148812
cyth3a / cytohesin 3a / CYTH3* / O08967* / O43739* / cytohesin 3*ENSDARG0000000780712
cyth1a / cytohesin 1a / CYTH1* / Q15438* / cytohesin 1*ENSDARG0000007674212
CYTH2 / si:dkey-283b15.4 / P63034* / Q99418* / AC008403.1* / cytohesin 2*ENSDARG0000002880012
cyth1a / cyth3b / cytohesin 1a / CYTH3* / O43739* / cytohesin 3*ENSDARG0000000515912
cyth4a / cytohesin 4a / CYTH4* / Q80YW0* / Q9UIA0* / cytohesin 4*ENSDARG0000003801111
fbxo8 / F-box protein 8 / Q9NRD0* / Q9QZN3* / F-box only protein 8 *ENSDARG000000074778
si:ch211-189a21.1 / CYTH3* / O08967* / O43739* / cytohesin 3*ENSDARG000000898294


Protein motifs (from Interpro)
Interpro ID Name
 IPR000048  IQ motif, EF-hand binding site
 IPR000904  Sec7 domain
 IPR011993  PH-like domain superfamily
 IPR023394  Sec7, C-terminal domain superfamily
 IPR030737  IQ motif and SEC7 domain-containing protein 1
 IPR033742  IQ motif and SEC7 domain-containing protein, PH domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0030036 actin cytoskeleton organization IBA
 biological_processGO:0032012 regulation of ARF protein signal transduction IEA
 biological_processGO:0043547 positive regulation of GTPase activity IEA
 molecular_functionGO:0005086 ARF guanyl-nucleotide exchange factor activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr