ENSDARG00000016903


Danio rerio

Features
Gene ID: ENSDARG00000016903
  
Biological name :wdr5
  
Synonyms : wdr5 / WD repeat domain 5
  
Possible biological names infered from orthology : P61964 / P61965 / Q86VZ2 / Q9D7H2 / WDR5B / WD repeat domain 5B
  
Species: Danio rerio
  
Chr. number: 21
Strand: 1
Band:
Gene start: 18274825
Gene end: 18290978
  
Corresponding Affymetrix probe sets: Dr.13376.1.S1_at (Zebrafish Array)   Dr.13376.1.S2_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000017859
Ensembl peptide - ENSDARP00000121768
Ensembl peptide - ENSDARP00000112835
NCBI entrez gene - 406372     See in Manteia.
RefSeq - NM_213099
RefSeq Peptide - NP_998264
swissprot - E9QEX1
swissprot - E9QDU5
swissprot - Q7ZTX2
ZFIN ID - ZDB-GENE-040426-2082
Ensembl - ENSDARG00000016903
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 WDR5ENSGALG00000002659Gallus gallus
 WDR5ENSG00000196363Homo sapiens
 WDR5BENSG00000196981Homo sapiens
 Wdr5ENSMUSG00000026917Mus musculus
 Wdr5bENSMUSG00000034379Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q7T394 / pafah1b1a / platelet-activating factor acetylhydrolase 1b, regulatory subunit 1a / P43034* / P63005* / PAFAH1B1* / platelet-activating factor acetylhydrolase, isoform 1b, subunit 1...ENSDARG0000003201332
nle1 / notchless homolog 1 (Drosophila) / Q8VEJ4* / Q9NVX2* / notchless homolog 1* / Notchless protein homolog 1 *ENSDARG0000005710531
pafah1b1b / platelet-activating factor acetylhydrolase 1b, regulatory subunit 1b / P43034* / PAFAH1B1* / platelet activating factor acetylhydrolase 1b regulatory subunit 1*ENSDARG0000002659531
snrnp40 / small nuclear ribonucleoprotein 40 (U5) / Q96DI7* / Q6PE01* / small nuclear ribonucleoprotein U5 subunit 40* / U5 small nuclear ribonucleoprotein 40 kDa protein *ENSDARG0000002316030
daw1 / dynein assembly factor with WDR repeat domains 1 / Q8N136* / dynein assembly factor with WD repeats 1*ENSDARG0000002146226
poc1b / A2CEH0 / POC1 centriolar protein B / Q8BHD1* / Q8TC44*ENSDARG0000002111026
katnb1 / Q7ZUV2 / katanin p80 (WD repeat containing) subunit B 1 / Q9BVA0* / Q8BG40* / katanin regulatory subunit B1* / Katanin p80 WD40 repeat-containing subunit B1 *ENSDARG0000000545623
wdr61 / WD repeat domain 61 / Q9ERF3* / Q9GZS3*ENSDARG0000000775518
wdr38 / WD repeat domain 38 / Q5JTN6*ENSDARG0000004480116
poc1a / POC1 centriolar protein A / Q8JZX3* / Q8NBT0*ENSDARG0000007853315


Protein motifs (from Interpro)
Interpro ID Name
 IPR001680  WD40 repeat
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017986  WD40-repeat-containing domain
 IPR019775  WD40 repeat, conserved site
 IPR020472  G-protein beta WD-40 repeat


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0060271 cilium assembly IBA
 cellular_componentGO:0036064 ciliary basal body IBA


Pathways (from Reactome)
Pathway description
HATs acetylate histones
RUNX1 regulates genes involved in megakaryocyte differentiation and platelet function
Neddylation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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