ENSDARG00000020711


Danio rerio

Features
Gene ID: ENSDARG00000020711
  
Biological name :rrm2
  
Synonyms : P79733 / ribonucleotide reductase M2 polypeptide / rrm2
  
Possible biological names infered from orthology : AC007240.1 / P11157 / P31350 / Ribonucleoside-diphosphate reductase subunit M2 / ribonucleotide reductase regulatory subunit M2
  
Species: Danio rerio
  
Chr. number: 20
Strand: -1
Band:
Gene start: 29492469
Gene end: 29499426
  
Corresponding Affymetrix probe sets: Dr.1691.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000136960
Ensembl peptide - ENSDARP00000008907
Ensembl peptide - ENSDARP00000127313
Ensembl peptide - ENSDARP00000127334
Ensembl peptide - ENSDARP00000127428
Ensembl peptide - ENSDARP00000127458
Ensembl peptide - ENSDARP00000133583
Ensembl peptide - ENSDARP00000135321
NCBI entrez gene - 100330864     See in Manteia.
RefSeq - NM_001351700
RefSeq - NM_001351701
RefSeq Peptide - NP_001338629
RefSeq Peptide - NP_001338630
swissprot - G3G7U3
swissprot - G3G7U0
swissprot - G3G7U2
swissprot - P79733
swissprot - U3JAP5
swissprot - U3JAR5
swissprot - U3JB06
swissprot - U3JB36
ZFIN ID - ZDB-GENE-990415-25
Ensembl - ENSDARG00000020711
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000016442Gallus gallus
 AC007240.1ENSG00000284681Homo sapiens
 RRM2ENSG00000171848Homo sapiens
 Rrm2ENSMUSG00000020649Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
rrm2 / P79733 / ribonucleotide reductase M2 polypeptide / P31350* / P11157* / AC007240.1* / ribonucleotide reductase regulatory subunit M2* / Ribonucleoside-diphosphate reductase subunit M2 *ENSDARG00000078069100
rrm2b / ribonucleotide reductase M2 b / Q7LG56* / Q6PEE3* / ribonucleotide reductase regulatory TP53 inducible subunit M2B* / Mus musculus ribonucleotide reductase M2 B (TP53 inducible) (Rr...ENSDARG0000003336765


Protein motifs (from Interpro)
Interpro ID Name
 IPR000358  Ribonucleotide reductase small subunit family
 IPR009078  Ferritin-like superfamily
 IPR030475  Ribonucleotide reductase small subunit, acitve site
 IPR033909  Ribonucleotide reductase small subunit


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006260 DNA replication IEA
 biological_processGO:0009263 deoxyribonucleotide biosynthetic process IEA
 biological_processGO:0055114 oxidation-reduction process IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005971 ribonucleoside-diphosphate reductase complex IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor IBA
 molecular_functionGO:0016491 oxidoreductase activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000014017 rrm1 / ribonucleotide reductase M1 polypeptide / P07742* / P23921* / ribonucleotide reductase catalytic subunit M1* / Ribonucleoside-diphosphate reductase large subunit *  / complex
 ENSDARG00000031435 zgc:56493 / TXN* / Txn1* / Q6A555* / Q86VQ3* / P10639* / Q69AB2* / TXNDC2* / TXNDC8* / P10599* / thioredoxin* / thioredoxin 1* / thioredoxin domain containing 2* / thioredoxin domain contai...  / reaction
 ENSDARG00000020711 rrm2 / P79733 / ribonucleotide reductase M2 polypeptide / P31350* / P11157* / AC007240.1* / ribonucleotide reductase regulatory subunit M2* / Ribonucleoside-diphosphate reductase subunit M2 *  / complex
 ENSDARG00000044125 txn / thioredoxin / Txn1* / Q6A555* / Q86VQ3* / TXNDC8* / P10599* / P10639* / Q69AB2* / TXNDC2* / thioredoxin 1* / thioredoxin domain containing 2* / thioredoxin domain containing 8* / thio...  / reaction






 

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