ENSDARG00000023290


Danio rerio

Features
Gene ID: ENSDARG00000023290
  
Biological name :fabp3
  
Synonyms : fabp3 / fatty acid binding protein 3, muscle and heart
  
Possible biological names infered from orthology : fatty acid binding protein 3 / Fatty acid-binding protein, heart / P05413 / P11404
  
Species: Danio rerio
  
Chr. number: 19
Strand: 1
Band:
Gene start: 42955280
Gene end: 42993306
  
Corresponding Affymetrix probe sets: Dr.6814.1.S1_at (Zebrafish Array)   NM_152961_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000039143
Ensembl peptide - ENSDARP00000125867
NCBI entrez gene - 171478     See in Manteia.
RefSeq - NM_152961
RefSeq Peptide - NP_694493
swissprot - I3ISI4
swissprot - Q8UVG7
ZFIN ID - ZDB-GENE-020318-2
Ensembl - ENSDARG00000023290
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 FABP3ENSGALG00000037050Gallus gallus
 FABP3ENSG00000121769Homo sapiens
 Fabp3ENSMUSG00000028773Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
fabp7a / fatty acid binding protein 7, brain, a / FABP7* / O15540* / P51880* / fatty acid binding protein 7* / Fatty acid-binding protein, brain *ENSDARG0000000769762
fabp7b / fatty acid binding protein 7, brain, b / FABP7* / O15540* / P51880* / fatty acid binding protein 7* / Fatty acid-binding protein, brain *ENSDARG0000003465062
fabp11a / fatty acid binding protein 11a / PMP2* / FABP4* / FABP5* / FABP9* / A6NFH5* / FABP12* / P02689* / P04117* / P15090* / P24526* / Q01469* / Q05816* / Q0Z7S8* / Q9DAK4* / O08716* / G...ENSDARG0000001729956
fabp11b / fatty acid binding protein 11b / PMP2* / FABP4* / FABP5* / FABP9* / A6NFH5* / FABP12* / P02689* / P04117* / P15090* / P24526* / Q01469* / Q05816* / Q0Z7S8* / Q9DAK4* / O08716* / G...ENSDARG0000000231149
crabp1a / cellular retinoic acid binding protein 1a / CRABP1* / P29762* / P62965* / cellular retinoic acid binding protein 1*ENSDARG0000004592642
crabp1b / cellular retinoic acid binding protein 1b / CRABP1* / P29762* / P62965* / cellular retinoic acid binding protein 1*ENSDARG0000003590441
rbp2a / retinol binding protein 2a, cellular / RBP2* / Q08652* / P50120* / retinol binding protein 2* / retinol binding protein 2, cellular*ENSDARG0000007003839
rbp2b / retinol binding protein 2b, cellularENSDARG0000009377438
CABZ01088982.1 / PMP2* / FABP9* / FABP4* / FABP5* / A6NFH5* / FABP12* / P02689* / P15090* / Q01469* / Q0Z7S8* / peripheral myelin protein 2* / fatty acid binding protein 4* / fatty acid bin...ENSDARG0000010925938
crabp2a / cellular retinoic acid binding protein 2, a / CRABP2* / P22935* / P29373* / cellular retinoic acid binding protein 2*ENSDARG0000007397836
rbp7b / retinol binding protein 7b, cellular / RBP7* / Q9EPC5* / Q96R05* / retinol binding protein 7* / retinol binding protein 7, cellular*ENSDARG0000007048635
rbp1 / retinol binding protein 1b, cellular / Q00915* / P09455* / retinol binding protein 1* / retinol binding protein 1, cellular*ENSDARG0000001807735
crabp2b / cellular retinoic acid binding protein 2, b / CRABP2* / P22935* / P29373* / cellular retinoic acid binding protein 2*ENSDARG0000003044934
rbp7a / retinol binding protein 7a, cellular / RBP7* / Q9EPC5* / Q96R05* / retinol binding protein 7* / retinol binding protein 7, cellular*ENSDARG0000009190634
rbp5 / retinol binding protein 1a, cellular / P82980* / retinol binding protein 5*ENSDARG0000010148131
si:ch211-119o8.7 / RBP1 (1 of many) / RBP1* / P09455* / Q00915* / retinol binding protein 1* / retinol binding protein 1, cellular*ENSDARG0000003874227


Protein motifs (from Interpro)
Interpro ID Name
 IPR000463  Cytosolic fatty-acid binding
 IPR000566  Lipocalin/cytosolic fatty-acid binding domain
 IPR012674  Calycin
 IPR031259  Intracellular lipid binding protein


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001947 heart looping IMP
 biological_processGO:0007507 heart development IMP
 biological_processGO:0043009 chordate embryonic development IMP
 molecular_functionGO:0008289 lipid binding IEA


Pathways (from Reactome)
Pathway description
Triglyceride catabolism


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000009 cardiac ventricle cardiac ventricle position , abnormal
cardiac ventricle decreased thickness , abnormal
Show

 ZFA:0000037 anatomical structure anatomical structure mitochondrial chromosome decreased amount , abnormal
Show

 ZFA:0000054 pericardium pericardium edematous , abnormal
Show

 ZFA:0000114 heart heart morphology , abnormal
Show

 ZFA:0000155 somite somite morphology , abnormal
Show

 ZFA:0000173 bulbus arteriosus bulbus arteriosus morphology , abnormal
Show

 ZFA:0000471 atrium atrium position , abnormal
atrium decreased thickness , abnormal
Show

 ZFA:0001094 whole organism whole organism increased weight , abnormal
Show

 ZFA:0001114 head head decreased size , abnormal
head malformed , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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