ENSDARG00000002311


Danio rerio

Features
Gene ID: ENSDARG00000002311
  
Biological name :fabp11b
  
Synonyms : fabp11b / fatty acid binding protein 11b
  
Possible biological names infered from orthology : A6NFH5 / FABP12 / FABP4 / FABP5 / FABP9 / fatty acid binding protein 12 / fatty acid binding protein 4 / fatty acid binding protein 5 / fatty acid binding protein 9 / Fatty acid-binding protein, adipocyte / Fatty acid-binding protein, epidermal / Gm37389 / O08716 / P02689 / P04117 / P15090 / P24526 / peripheral myelin protein 2 / PMP2 / Q01469 / Q05816 / Q0Z7S8 / Q9DAK4
  
Species: Danio rerio
  
Chr. number: 16
Strand: -1
Band:
Gene start: 16148761
Gene end: 16152199
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000013026
NCBI entrez gene - 553579     See in Manteia.
RefSeq - NM_001020558
RefSeq Peptide - NP_001018394
swissprot - Q503X5
ZFIN ID - ZDB-GENE-050522-391
Ensembl - ENSDARG00000002311
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 FABP4ENSGALG00000030025Gallus gallus
 FABP5ENSGALG00000041344Gallus gallus
 PMP2ENSGALG00000032453Gallus gallus
 A6NFH5ENSG00000197416Homo sapiens
 FABP4ENSG00000170323Homo sapiens
 FABP5ENSG00000164687Homo sapiens
 FABP9ENSG00000205186Homo sapiens
 PMP2ENSG00000147588Homo sapiens
 Fabp12ENSMUSG00000027530Mus musculus
 Fabp4ENSMUSG00000062515Mus musculus
 Fabp5ENSMUSG00000027533Mus musculus
 Fabp9ENSMUSG00000027528Mus musculus
 Gm37389ENSMUSG00000103124Mus musculus
 Pmp2ENSMUSG00000052468Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CABZ01088982.1 / PMP2* / FABP9* / FABP4* / FABP5* / A6NFH5* / FABP12* / P02689* / P15090* / Q01469* / Q0Z7S8* / peripheral myelin protein 2* / fatty acid binding protein 4* / fatty acid bin...ENSDARG0000010925966
fabp11a / fatty acid binding protein 11a / PMP2* / FABP4* / FABP5* / FABP9* / A6NFH5* / FABP12* / P02689* / P04117* / P15090* / P24526* / Q01469* / Q05816* / Q0Z7S8* / Q9DAK4* / O08716* / G...ENSDARG0000001729965
fabp7a / fatty acid binding protein 7, brain, a / FABP7* / O15540* / P51880* / fatty acid binding protein 7* / Fatty acid-binding protein, brain *ENSDARG0000000769750
fabp7b / fatty acid binding protein 7, brain, b / FABP7* / O15540* / P51880* / fatty acid binding protein 7* / Fatty acid-binding protein, brain *ENSDARG0000003465050
fabp3 / fatty acid binding protein 3, muscle and heart / P05413* / P11404* / fatty acid binding protein 3* / Fatty acid-binding protein, heart *ENSDARG0000002329049
crabp1a / cellular retinoic acid binding protein 1a / CRABP1* / P29762* / P62965* / cellular retinoic acid binding protein 1*ENSDARG0000004592638
crabp1b / cellular retinoic acid binding protein 1b / CRABP1* / P29762* / P62965* / cellular retinoic acid binding protein 1*ENSDARG0000003590434
crabp2a / cellular retinoic acid binding protein 2, a / CRABP2* / P22935* / P29373* / cellular retinoic acid binding protein 2*ENSDARG0000007397834
crabp2b / cellular retinoic acid binding protein 2, b / CRABP2* / P22935* / P29373* / cellular retinoic acid binding protein 2*ENSDARG0000003044932
rbp7b / retinol binding protein 7b, cellular / RBP7* / Q9EPC5* / Q96R05* / retinol binding protein 7* / retinol binding protein 7, cellular*ENSDARG0000007048631
rbp2a / retinol binding protein 2a, cellular / RBP2* / Q08652* / P50120* / retinol binding protein 2* / retinol binding protein 2, cellular*ENSDARG0000007003831
rbp5 / retinol binding protein 1a, cellular / P82980* / retinol binding protein 5*ENSDARG0000010148131
rbp1 / retinol binding protein 1b, cellular / Q00915* / P09455* / retinol binding protein 1* / retinol binding protein 1, cellular*ENSDARG0000001807730
rbp2b / retinol binding protein 2b, cellularENSDARG0000009377429
rbp7a / retinol binding protein 7a, cellular / RBP7* / Q9EPC5* / Q96R05* / retinol binding protein 7* / retinol binding protein 7, cellular*ENSDARG0000009190628
si:ch211-119o8.7 / RBP1 (1 of many) / RBP1* / P09455* / Q00915* / retinol binding protein 1* / retinol binding protein 1, cellular*ENSDARG0000003874227


Protein motifs (from Interpro)
Interpro ID Name
 IPR000463  Cytosolic fatty-acid binding
 IPR000566  Lipocalin/cytosolic fatty-acid binding domain
 IPR012674  Calycin
 IPR031259  Intracellular lipid binding protein


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0033552 response to vitamin B3 IDA
 biological_processGO:0034694 response to prostaglandin IDA
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0008289 lipid binding IEA


Pathways (from Reactome)
Pathway description
Triglyceride catabolism
Signaling by Retinoic Acid
Neutrophil degranulation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000057737 rxraa / retinoid X receptor, alpha a / RXRA* / P19793* / P28700* / retinoid X receptor alpha*  / reaction / complex
 ENSDARG00000044525 pparda / peroxisome proliferator-activated receptor delta a / PPARD* / P35396* / Q03181* / peroxisome proliferator activated receptor delta*  / complex / reaction
 ENSDARG00000009473 ppardb / peroxisome proliferator-activated receptor delta b / PPARD* / P35396* / Q03181* / peroxisome proliferator activated receptor delta*  / reaction / complex






 

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