Manteia

ENSDARG00000017299

Danio rerio

Features

Gene ID:	ENSDARG00000017299

Biological name :	fabp11a

Synonyms :	fabp11a / fatty acid binding protein 11a

Possible biological names infered from orthology :	A6NFH5 / FABP12 / FABP4 / FABP5 / FABP9 / fatty acid binding protein 12 / fatty acid binding protein 4 / fatty acid binding protein 5 / fatty acid binding protein 9 / Fatty acid-binding protein, adipocyte / Fatty acid-binding protein, epidermal / Gm37389 / O08716 / P02689 / P04117 / P15090 / P24526 / peripheral myelin protein 2 / PMP2 / Q01469 / Q05816 / Q0Z7S8 / Q9DAK4

Species:	Danio rerio

Chr. number:	19
Strand:	1
Band:
Gene start:	32166702
Gene end:	32169161

Corresponding Affymetrix probe sets:

Cross references:	Ensembl peptide - ENSDARP00000021916 NCBI entrez gene - 447944 See in Manteia. RefSeq - NM_001004682 RefSeq Peptide - NP_001004682 swissprot - Q66I80 ZFIN ID - ZDB-GENE-040912-132 Ensembl - ENSDARG00000017299

See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed

Ortholog prediction (from Ensembl)

Ortholog name	ID	Species
FABP4	ENSGALG00000030025	Gallus gallus
FABP5	ENSGALG00000041344	Gallus gallus
PMP2	ENSGALG00000032453	Gallus gallus
A6NFH5	ENSG00000197416	Homo sapiens
FABP4	ENSG00000170323	Homo sapiens
FABP5	ENSG00000164687	Homo sapiens
FABP9	ENSG00000205186	Homo sapiens
PMP2	ENSG00000147588	Homo sapiens
Fabp12	ENSMUSG00000027530	Mus musculus
Fabp4	ENSMUSG00000062515	Mus musculus
Fabp5	ENSMUSG00000027533	Mus musculus
Fabp9	ENSMUSG00000027528	Mus musculus
Gm37389	ENSMUSG00000103124	Mus musculus
Pmp2	ENSMUSG00000052468	Mus musculus

Paralog prediction (from Ensembl)

Paralog name	ID	Similarity(%)
fabp11b / fatty acid binding protein 11b / PMP2* / FABP4* / FABP5* / FABP9* / A6NFH5* / FABP12* / P02689* / P04117* / P15090* / P24526* / Q01469* / Q05816* / Q0Z7S8* / Q9DAK4* / O08716* / G...	ENSDARG00000002311	65
fabp7b / fatty acid binding protein 7, brain, b / FABP7* / O15540* / P51880* / fatty acid binding protein 7* / Fatty acid-binding protein, brain *	ENSDARG00000034650	56
fabp3 / fatty acid binding protein 3, muscle and heart / P05413* / P11404* / fatty acid binding protein 3* / Fatty acid-binding protein, heart *	ENSDARG00000023290	55
fabp7a / fatty acid binding protein 7, brain, a / FABP7* / O15540* / P51880* / fatty acid binding protein 7* / Fatty acid-binding protein, brain *	ENSDARG00000007697	54
CABZ01088982.1 / PMP2* / FABP9* / FABP4* / FABP5* / A6NFH5* / FABP12* / P02689* / P15090* / Q01469* / Q0Z7S8* / peripheral myelin protein 2* / fatty acid binding protein 4* / fatty acid bin...	ENSDARG00000109259	46
crabp1a / cellular retinoic acid binding protein 1a / CRABP1* / P29762* / P62965* / cellular retinoic acid binding protein 1*	ENSDARG00000045926	40
crabp1b / cellular retinoic acid binding protein 1b / CRABP1* / P29762* / P62965* / cellular retinoic acid binding protein 1*	ENSDARG00000035904	37
crabp2b / cellular retinoic acid binding protein 2, b / CRABP2* / P22935* / P29373* / cellular retinoic acid binding protein 2*	ENSDARG00000030449	33
crabp2a / cellular retinoic acid binding protein 2, a / CRABP2* / P22935* / P29373* / cellular retinoic acid binding protein 2*	ENSDARG00000073978	33
rbp7a / retinol binding protein 7a, cellular / RBP7* / Q9EPC5* / Q96R05* / retinol binding protein 7* / retinol binding protein 7, cellular*	ENSDARG00000091906	31
rbp7b / retinol binding protein 7b, cellular / RBP7* / Q9EPC5* / Q96R05* / retinol binding protein 7* / retinol binding protein 7, cellular*	ENSDARG00000070486	31
rbp2b / retinol binding protein 2b, cellular	ENSDARG00000093774	31
rbp2a / retinol binding protein 2a, cellular / RBP2* / Q08652* / P50120* / retinol binding protein 2* / retinol binding protein 2, cellular*	ENSDARG00000070038	31
rbp1 / retinol binding protein 1b, cellular / Q00915* / P09455* / retinol binding protein 1* / retinol binding protein 1, cellular*	ENSDARG00000018077	29
si:ch211-119o8.7 / RBP1 (1 of many) / RBP1* / P09455* / Q00915* / retinol binding protein 1* / retinol binding protein 1, cellular*	ENSDARG00000038742	28
rbp5 / retinol binding protein 1a, cellular / P82980* / retinol binding protein 5*	ENSDARG00000101481	26

Protein motifs (from Interpro)

Interpro ID	Name
IPR000463	Cytosolic fatty-acid binding
IPR000566	Lipocalin/cytosolic fatty-acid binding domain
IPR012674	Calycin

Gene Ontology (GO)

Type	GO ID	Term	Ev.Code
biological_process	GO:0001654	eye development	IMP
cellular_component	GO:0005575	cellular_component	ND
molecular_function	GO:0008289	lipid binding	IEA

Pathways (from Reactome)

Pathway description

Triglyceride catabolism

Signaling by Retinoic Acid

Neutrophil degranulation

Phenotype (from MGI, Zfin or HPO)

ID	Phenotype	Definition	Genetic BG
ZFA:0000107	eye	eye decreased size , abnormal eye fused with eye , abnormal eye agenesis , abnormal	Show
ZFA:0001094	whole organism	whole organism has fewer parts of type eye , abnormal	Show
ZFA:0009052	motor neuron	motor neuron axon guidance process quality , abnormal motor neuron axon morphology , abnormal	Show

Interacting proteins (from Reactome)

Interactor ID	Name	Interaction type
ENSDARG00000057737	rxraa / retinoid X receptor, alpha a / RXRA* / P19793* / P28700* / retinoid X receptor alpha*	/ reaction / complex
ENSDARG00000044525	pparda / peroxisome proliferator-activated receptor delta a / PPARD* / P35396* / Q03181* / peroxisome proliferator activated receptor delta*	/ complex / reaction
ENSDARG00000009473	ppardb / peroxisome proliferator-activated receptor delta b / PPARD* / P35396* / Q03181* / peroxisome proliferator activated receptor delta*	/ reaction / complex

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		© Olivier Tassy / Olivier Pourquie 2007-2024 contact: otassy@igbmc.fr