ENSDARG00000036505


Danio rerio

Features
Gene ID: ENSDARG00000036505
  
Biological name :syt4
  
Synonyms : synaptotagmin IV / syt4
  
Possible biological names infered from orthology : P40749 / Q9H2B2 / synaptotagmin 4
  
Species: Danio rerio
  
Chr. number: 7
Strand: 1
Band:
Gene start: 23907692
Gene end: 23916118
  
Corresponding Affymetrix probe sets: Dr.13868.1.S1_at (Zebrafish Array)   NM_199948_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000045478
NCBI entrez gene - 335357     See in Manteia.
RefSeq - NM_199948
RefSeq Peptide - NP_956242
swissprot - Q6PBU6
ZFIN ID - ZDB-GENE-030131-7297
Ensembl - ENSDARG00000036505
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SYT4ENSGALG00000042626Gallus gallus
 SYT4ENSG00000132872Homo sapiens
 Syt4ENSMUSG00000024261Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
syt11a / synaptotagmin XIa / SYT11* / Q9BT88* / Q9R0N3* / synaptotagmin 11*ENSDARG0000005791348
syt11b / synaptotagmin XIb / SYT11* / Q9BT88* / Q9R0N3* / synaptotagmin 11*ENSDARG0000005610545
syt7b / synaptotagmin VIIb / SYT7* / O43581* / Q9R0N7* / synaptotagmin 7*ENSDARG0000007806034
syt7a / synaptotagmin VIIa / SYT7* / O43581* / Q9R0N7* / synaptotagmin 7*ENSDARG0000006356831
syt10 / synaptotagmin X / Q6XYQ8* / Q9R0N4* / synaptotagmin 10*ENSDARG0000004575029
syt9b / synaptotagmin IXb / SYT9* / Q86SS6* / Q9R0N9* / synaptotagmin 9*ENSDARG0000002923928
syt1a / synaptotagmin Ia / SYT1* / P46096* / P21579* / synaptotagmin 1* / synaptotagmin I*ENSDARG0000003061428
syt5b / synaptotagmin Vb / SYT5* / O00445* / Q9R0N5* / synaptotagmin 5*ENSDARG0000001164028
syt9a / synaptotagmin IXa / SYT9* / Q86SS6* / synaptotagmin 9*ENSDARG0000000399428
syt6a / synaptotagmin VIa / SYT6* / Q9R0N8* / Q5T7P8* / synaptotagmin 6* / synaptotagmin VI*ENSDARG0000007673028
syt6b / synaptotagmin VIb / SYT6* / Q9R0N8* / Q5T7P8* / synaptotagmin 6* / synaptotagmin VI*ENSDARG0000003146327
syt3 / synaptotagmin III / Q9BQG1* / synaptotagmin 3*ENSDARG0000007583027
syt5a / synaptotagmin Va / SYT5* / O00445* / Q9R0N5* / synaptotagmin 5*ENSDARG0000003794126
syt2a / synaptotagmin IIa / SYT2* / Q8N9I0* / synaptotagmin 2* / synaptotagmin II*ENSDARG0000002520626
syt1b / synaptotagmin Ib / SYT1* / P46096* / P21579* / synaptotagmin 1* / synaptotagmin I*ENSDARG0000004235025
SYT2 / synaptotagmin 2 / Q8N9I0*ENSDARG0000001416913


Protein motifs (from Interpro)
Interpro ID Name
 IPR000008  C2 domain
 IPR001565  Synaptotagmin
 IPR028683  Synaptotagmin-4


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006887 exocytosis IEA
 biological_processGO:0006906 vesicle fusion IBA
 biological_processGO:0048791 calcium ion-regulated exocytosis of neurotransmitter IBA
 cellular_componentGO:0005886 plasma membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0045202 synapse IEA
 cellular_componentGO:0098793 presynapse IEA
 molecular_functionGO:0019905 syntaxin binding IBA
 molecular_functionGO:0030276 clathrin binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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