ENSDARG00000037941


Danio rerio

Features
Gene ID: ENSDARG00000037941
  
Biological name :syt5a
  
Synonyms : synaptotagmin Va / syt5a
  
Possible biological names infered from orthology : O00445 / Q9R0N5 / synaptotagmin 5 / SYT5
  
Species: Danio rerio
  
Chr. number: 3
Strand: 1
Band:
Gene start: 32142382
Gene end: 32151167
  
Corresponding Affymetrix probe sets: Dr.11215.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000122114
NCBI entrez gene - 436686     See in Manteia.
RefSeq - NM_001103137
RefSeq - XM_009299530
RefSeq Peptide - NP_001096607
swissprot - F1QX49
ZFIN ID - ZDB-GENE-040718-110
Ensembl - ENSDARG00000037941
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SYT5ENSG00000129990Homo sapiens
 Syt5ENSMUSG00000004961Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
syt5b / synaptotagmin Vb / SYT5* / O00445* / Q9R0N5* / synaptotagmin 5*ENSDARG0000001164075
syt1a / synaptotagmin Ia / SYT1* / P46096* / P21579* / synaptotagmin 1* / synaptotagmin I*ENSDARG0000003061459
syt2a / synaptotagmin IIa / SYT2* / Q8N9I0* / synaptotagmin 2* / synaptotagmin II*ENSDARG0000002520658
syt1b / synaptotagmin Ib / SYT1* / P46096* / P21579* / synaptotagmin 1* / synaptotagmin I*ENSDARG0000004235049
syt3 / synaptotagmin III / Q9BQG1* / synaptotagmin 3*ENSDARG0000007583034
syt7a / synaptotagmin VIIa / SYT7* / O43581* / Q9R0N7* / synaptotagmin 7*ENSDARG0000006356834
syt6a / synaptotagmin VIa / SYT6* / Q9R0N8* / Q5T7P8* / synaptotagmin 6* / synaptotagmin VI*ENSDARG0000007673034
syt7b / synaptotagmin VIIb / SYT7* / O43581* / Q9R0N7* / synaptotagmin 7*ENSDARG0000007806034
syt10 / synaptotagmin X / Q6XYQ8* / Q9R0N4* / synaptotagmin 10*ENSDARG0000004575033
syt6b / synaptotagmin VIb / SYT6* / Q9R0N8* / Q5T7P8* / synaptotagmin 6* / synaptotagmin VI*ENSDARG0000003146332
syt9a / synaptotagmin IXa / SYT9* / Q86SS6* / synaptotagmin 9*ENSDARG0000000399431
syt9b / synaptotagmin IXb / SYT9* / Q86SS6* / Q9R0N9* / synaptotagmin 9*ENSDARG0000002923931
syt11a / synaptotagmin XIa / SYT11* / Q9BT88* / Q9R0N3* / synaptotagmin 11*ENSDARG0000005791329
syt11b / synaptotagmin XIb / SYT11* / Q9BT88* / Q9R0N3* / synaptotagmin 11*ENSDARG0000005610529
SYT2 / synaptotagmin 2 / Q8N9I0*ENSDARG0000001416928
syt4 / synaptotagmin IV / P40749* / Q9H2B2* / synaptotagmin 4*ENSDARG0000003650528


Protein motifs (from Interpro)
Interpro ID Name
 IPR000008  C2 domain
 IPR001565  Synaptotagmin


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006906 vesicle fusion IBA
 biological_processGO:0017158 regulation of calcium ion-dependent exocytosis IBA
 biological_processGO:0048488 synaptic vesicle endocytosis IBA
 biological_processGO:0048791 calcium ion-regulated exocytosis of neurotransmitter IBA
 cellular_componentGO:0005886 plasma membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030672 synaptic vesicle membrane IBA
 molecular_functionGO:0005509 calcium ion binding IBA
 molecular_functionGO:0005544 calcium-dependent phospholipid binding IBA
 molecular_functionGO:0019905 syntaxin binding IBA
 molecular_functionGO:0030276 clathrin binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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