ENSDARG00000057913


Danio rerio

Features
Gene ID: ENSDARG00000057913
  
Biological name :syt11a
  
Synonyms : synaptotagmin XIa / syt11a
  
Possible biological names infered from orthology : Q9BT88 / Q9R0N3 / synaptotagmin 11 / SYT11
  
Species: Danio rerio
  
Chr. number: 19
Strand: 1
Band:
Gene start: 23982466
Gene end: 24034710
  
Corresponding Affymetrix probe sets: Dr.3255.1.A1_at (Zebrafish Array)   Dr.9125.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000075119
NCBI entrez gene - 406769     See in Manteia.
swissprot - F1RD06
ZFIN ID - ZDB-GENE-040426-2815
Ensembl - ENSDARG00000057913
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SYT11ENSGALG00000014646Gallus gallus
 SYT11ENSG00000132718Homo sapiens
 Syt11ENSMUSG00000068923Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
syt11b / synaptotagmin XIb / SYT11* / Q9BT88* / Q9R0N3* / synaptotagmin 11*ENSDARG0000005610570
syt4 / synaptotagmin IV / P40749* / Q9H2B2* / synaptotagmin 4*ENSDARG0000003650547
syt1a / synaptotagmin Ia / SYT1* / P46096* / P21579* / synaptotagmin 1* / synaptotagmin I*ENSDARG0000003061430
syt7b / synaptotagmin VIIb / SYT7* / O43581* / Q9R0N7* / synaptotagmin 7*ENSDARG0000007806030
syt7a / synaptotagmin VIIa / SYT7* / O43581* / Q9R0N7* / synaptotagmin 7*ENSDARG0000006356830
syt5b / synaptotagmin Vb / SYT5* / O00445* / Q9R0N5* / synaptotagmin 5*ENSDARG0000001164028
syt9a / synaptotagmin IXa / SYT9* / Q86SS6* / synaptotagmin 9*ENSDARG0000000399428
syt6a / synaptotagmin VIa / SYT6* / Q9R0N8* / Q5T7P8* / synaptotagmin 6* / synaptotagmin VI*ENSDARG0000007673028
syt10 / synaptotagmin X / Q6XYQ8* / Q9R0N4* / synaptotagmin 10*ENSDARG0000004575028
syt9b / synaptotagmin IXb / SYT9* / Q86SS6* / Q9R0N9* / synaptotagmin 9*ENSDARG0000002923928
syt2a / synaptotagmin IIa / SYT2* / Q8N9I0* / synaptotagmin 2* / synaptotagmin II*ENSDARG0000002520627
syt3 / synaptotagmin III / Q9BQG1* / synaptotagmin 3*ENSDARG0000007583027
syt1b / synaptotagmin Ib / SYT1* / P46096* / P21579* / synaptotagmin 1* / synaptotagmin I*ENSDARG0000004235027
syt6b / synaptotagmin VIb / SYT6* / Q9R0N8* / Q5T7P8* / synaptotagmin 6* / synaptotagmin VI*ENSDARG0000003146327
syt5a / synaptotagmin Va / SYT5* / O00445* / Q9R0N5* / synaptotagmin 5*ENSDARG0000003794126
SYT2 / synaptotagmin 2 / Q8N9I0*ENSDARG0000001416913


Protein motifs (from Interpro)
Interpro ID Name
 IPR000008  C2 domain
 IPR001565  Synaptotagmin
 IPR028699  Synaptotagmin-11


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006906 vesicle fusion IBA
 biological_processGO:0048791 calcium ion-regulated exocytosis of neurotransmitter IBA
 cellular_componentGO:0005886 plasma membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0045202 synapse IEA
 cellular_componentGO:0098793 presynapse IEA
 molecular_functionGO:0019905 syntaxin binding IBA
 molecular_functionGO:0030276 clathrin binding IBA


Pathways (from Reactome)
Pathway description
Cargo recognition for clathrin-mediated endocytosis
Clathrin-mediated endocytosis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000057913 syt11a / synaptotagmin XIa / SYT11* / Q9BT88* / Q9R0N3* / synaptotagmin 11*  / complex
 ENSDARG00000056105 syt11b / synaptotagmin XIb / SYT11* / Q9BT88* / Q9R0N3* / synaptotagmin 11*  / complex






 

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