ENSDARG00000036956


Danio rerio

Features
Gene ID: ENSDARG00000036956
  
Biological name :asxl1
  
Synonyms : additional sex combs like transcriptional regulator 1 / asxl1
  
Possible biological names infered from orthology : additional sex combs like 1, transcriptional regulator / P59598 / Putative Polycomb group protein ASXL1 / Q8IXJ9
  
Species: Danio rerio
  
Chr. number: 23
Strand: 1
Band:
Gene start: 30730121
Gene end: 30752553
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000121943
Ensembl peptide - ENSDARP00000042943
NCBI entrez gene - 403066     See in Manteia.
RefSeq - XM_001341206
RefSeq - XM_021473724
swissprot - F1RC47
swissprot - F1Q5H5
ZFIN ID - ZDB-GENE-091116-9
Ensembl - ENSDARG00000036956
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ASXL1ENSGALG00000006612Gallus gallus
 ASXL1ENSG00000171456Homo sapiens
 Asxl1ENSMUSG00000042548Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
asxl2 / additional sex combs like transcriptional regulator 2 / Q76L83* / putative Polycomb group protein ASXL2 isoform 1 * / additional sex combs like 2, transcriptional regulator*ENSDARG0000007650118


Protein motifs (from Interpro)
Interpro ID Name
 IPR007759  HB1/Asxl, restriction endonuclease HTH domain
 IPR024811  Polycomb protein ASX/ASX-like
 IPR024815  ASX-like protein 1
 IPR026905  Protein ASX-like, PHD domain
 IPR028020  ASX homology domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 molecular_functionGO:0003677 DNA binding IEA


Pathways (from Reactome)
Pathway description
UCH proteinases


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000012519 hcfc1b / host cell factor C1b / HCFC1* / Q61191* / P51610* / host cell factor C1* / Host cell factor 1 HCF N-terminal chain 1 HCF N-terminal chain 2 HCF N-terminal chain 3 HCF N-terminal ch...  / complex
 ENSDARG00000042796 yy1a / YY1 transcription factor a / YY1* / ZFP42* / Q96MM3* / P25490* / Q00899* / zinc finger protein 42* / YY1 transcription factor* / ZFP42 zinc finger protein*  / complex
 ENSDARG00000037872 foxk1 / forkhead box K1 / P42128* / P85037* / Forkhead box protein K1 *  / complex
 ENSDARG00000027978 yy1b / YY1 transcription factor b / YY1* / ZFP42* / Q96MM3* / P25490* / Q00899* / zinc finger protein 42* / YY1 transcription factor* / ZFP42 zinc finger protein*  / complex
 ENSDARG00000015990 hcfc1a / host cell factor C1a / HCFC1* / Q61191* / P51610* / host cell factor C1* / Host cell factor 1 HCF N-terminal chain 1 HCF N-terminal chain 2 HCF N-terminal chain 3 HCF N-terminal ch...  / complex
 ENSDARG00000011609 si:ch211-262e15.1 / FOXK2* / Q01167* / Q3UCQ1* / forkhead box K2* / Forkhead box protein K2 *  / complex
 ENSDARG00000030583 foxk2 / forkhead box K2 / Q01167*  / complex
 ENSDARG00000063051 bap1 / BRCA1 associated protein-1 (ubiquitin carboxy-terminal hydrolase) / Q92560* / Q99PU7* / BRCA1 associated protein 1* / Ubiquitin carboxyl-terminal hydrolase BAP1 *  / reaction / complex






 

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