ENSDARG00000054332


Danio rerio

Features
Gene ID: ENSDARG00000054332
  
Biological name :trim66
  
Synonyms : trim66 / tripartite motif containing 66
  
Possible biological names infered from orthology : O15016 / Q924W6
  
Species: Danio rerio
  
Chr. number: 7
Strand: -1
Band:
Gene start: 28423996
Gene end: 28463106
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000119465
NCBI entrez gene - 566660     See in Manteia.
RefSeq - XM_021471913
RefSeq - XM_021471914
RefSeq - XM_021471915
swissprot - Q5RHY8
ZFIN ID - ZDB-GENE-040724-145
Ensembl - ENSDARG00000054332
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TRIM66ENSGALG00000005958Gallus gallus
 O15016ENSG00000166436Homo sapiens
 Q924W6ENSMUSG00000031026Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
trim33 / tripartite motif containing 33 / Q9UPN9*ENSDARG0000001618120
trim24 / tripartite motif containing 24ENSDARG0000010335018
trim33l / tripartite motif containing 33, likeENSDARG0000008612613
trim2a / tripartite motif containing 2a / TRIM2* / Q9ESN6* / Q9C040* / tripartite motif containing 2*ENSDARG000000318178
trim71 / E7FAM5 / tripartite motif containing 71, E3 ubiquitin protein ligase / Q2Q1W2* / Q1PSW8* / tripartite motif containing 71*ENSDARG000000755938
trim3a / tripartite motif containing 3a / TRIM3* / Q9R1R2* / O75382* / tripartite motif containing 3*ENSDARG000000637117
trim2b / tripartite motif containing 2b / TRIM2* / Q9ESN6* / Q9C040* / tripartite motif containing 2*ENSDARG000000761747
trim3b / tripartite motif containing 3b / TRIM3* / Q9R1R2* / O75382* / tripartite motif containing 3*ENSDARG000000053977
trim45 / tripartite motif containing 45 / Q6PFY8* / Q9H8W5* / Tripartite motif-containing protein 45 *ENSDARG000000767815


Protein motifs (from Interpro)
Interpro ID Name
 IPR000315  B-box-type zinc finger
 IPR001487  Bromodomain
 IPR001965  Zinc finger, PHD-type
 IPR003649  B-box, C-terminal
 IPR011011  Zinc finger, FYVE/PHD-type
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR019786  Zinc finger, PHD-type, conserved site
 IPR019787  Zinc finger, PHD-finger


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005622 intracellular IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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