ENSDARG00000076174


Danio rerio

Features
Gene ID: ENSDARG00000076174
  
Biological name :trim2b
  
Synonyms : trim2b / tripartite motif containing 2b
  
Possible biological names infered from orthology : Q9C040 / Q9ESN6 / TRIM2 / tripartite motif containing 2
  
Species: Danio rerio
  
Chr. number: 1
Strand: 1
Band:
Gene start: 10003193
Gene end: 10033113
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000101218
Ensembl peptide - ENSDARP00000133473
Ensembl peptide - ENSDARP00000151232
NCBI entrez gene - 558046     See in Manteia.
swissprot - B8A5M1
ZFIN ID - ZDB-GENE-090312-70
Ensembl - ENSDARG00000076174
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TRIM2ENSGALG00000009207Gallus gallus
 TRIM2ENSG00000109654Homo sapiens
 Trim2ENSMUSG00000027993Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
trim2a / tripartite motif containing 2a / TRIM2* / Q9ESN6* / Q9C040* / tripartite motif containing 2*ENSDARG0000003181767
trim3b / tripartite motif containing 3b / TRIM3* / Q9R1R2* / O75382* / tripartite motif containing 3*ENSDARG0000000539758
trim3a / tripartite motif containing 3a / TRIM3* / Q9R1R2* / O75382* / tripartite motif containing 3*ENSDARG0000006371157
trim71 / E7FAM5 / tripartite motif containing 71, E3 ubiquitin protein ligase / Q2Q1W2* / Q1PSW8* / tripartite motif containing 71*ENSDARG0000007559327
trim45 / tripartite motif containing 45 / Q6PFY8* / Q9H8W5* / Tripartite motif-containing protein 45 *ENSDARG0000007678114
trim33 / tripartite motif containing 33 / Q9UPN9*ENSDARG0000001618113
trim24 / tripartite motif containing 24ENSDARG0000010335011
trim33l / tripartite motif containing 33, likeENSDARG0000008612611
trim66 / tripartite motif containing 66 / O15016* / Q924W6*ENSDARG0000005433211


Protein motifs (from Interpro)
Interpro ID Name
 IPR000315  B-box-type zinc finger
 IPR001258  NHL repeat
 IPR001298  Filamin/ABP280 repeat
 IPR003649  B-box, C-terminal
 IPR011042  Six-bladed beta-propeller, TolB-like
 IPR013017  NHL repeat, subgroup
 IPR013783  Immunoglobulin-like fold
 IPR014756  Immunoglobulin E-set
 IPR017868  Filamin/ABP280 repeat-like


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005622 intracellular IEA
 molecular_functionGO:0008270 zinc ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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