ENSDARG00000058593


Danio rerio

Features
Gene ID: ENSDARG00000058593
  
Biological name :sri
  
Synonyms : sorcin / sri
  
Possible biological names infered from orthology : P30626 / Q6P069
  
Species: Danio rerio
  
Chr. number: 16
Strand: 1
Band:
Gene start: 7242610
Gene end: 7260345
  
Corresponding Affymetrix probe sets: Dr.1278.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000075918
NCBI entrez gene - 393344     See in Manteia.
RefSeq - XM_005157861
swissprot - F1R4I7
ZFIN ID - ZDB-GENE-040426-1356
Ensembl - ENSDARG00000058593
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SRIENSGALG00000008985Gallus gallus
 SRIENSG00000075142Homo sapiens
 SriENSMUSG00000003161Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
zgc:92027 / GCA* / P28676* / Q8VC88* / grancalcin*ENSDARG0000002018766
pef1 / Q6DC93 / penta-EF-hand domain containing 1 / Q8BFY6* / Q9UBV8* / Peflin *ENSDARG0000002398934
pdcd6 / programmed cell death 6 / O75340* / P12815* / Programmed cell death protein 6 *ENSDARG0000000522032
capns1a / calpain, small subunit 1 a / Q9D7J7* / CAPNS1* / CAPNS2* / P04632* / Q96L46* / calpain small subunit 2* / calpain small subunit 1*ENSDARG0000003532928
capns1b / calpain, small subunit 1 b / Q9D7J7* / CAPNS1* / CAPNS2* / P04632* / Q96L46* / calpain small subunit 2* / calpain small subunit 1*ENSDARG0000001380426


Protein motifs (from Interpro)
Interpro ID Name
 IPR002048  EF-hand domain
 IPR011992  EF-hand domain pair
 IPR018247  EF-Hand 1, calcium-binding site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006508 proteolysis IBA
 cellular_componentGO:0005737 cytoplasm IBA
 molecular_functionGO:0004198 calcium-dependent cysteine-type endopeptidase activity IBA
 molecular_functionGO:0005509 calcium ion binding IEA


Pathways (from Reactome)
Pathway description
Stimuli-sensing channels
Reduction of cytosolic Ca++ levels
Sodium/Calcium exchangers
Ion homeostasis
Ion transport by P-type ATPases


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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