ENSDARG00000061635


Danio rerio

Features
Gene ID: ENSDARG00000061635
  
Biological name :myo5aa
  
Synonyms : myo5aa / myosin VAa
  
Possible biological names infered from orthology : MYO5A / myosin VA / Q99104 / Q9Y4I1 / Unconventional myosin-Va
  
Species: Danio rerio
  
Chr. number: 18
Strand: 1
Band:
Gene start: 38900092
Gene end: 39042201
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000123905
Ensembl peptide - ENSDARP00000124726
Ensembl peptide - ENSDARP00000139407
Ensembl peptide - ENSDARP00000082470
Ensembl peptide - ENSDARP00000120423
NCBI entrez gene - 562188     See in Manteia.
RefSeq - XM_009293795
RefSeq - XM_009293796
RefSeq - XM_009293797
RefSeq - XM_009293798
RefSeq - XM_021473330
swissprot - F8W2H6
swissprot - B3DJR2
swissprot - F1QYX4
swissprot - F8W4K6
swissprot - Q1LXI2
ZFIN ID - ZDB-GENE-041027-2
Ensembl - ENSDARG00000061635
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 MYO5AENSGALG00000031987Gallus gallus
 MYO5AENSG00000197535Homo sapiens
 Myo5aENSMUSG00000034593Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
myo5ab / myosin VAb / MYO5A* / Q99104* / Q9Y4I1* / myosin VA* / Unconventional myosin-Va *ENSDARG0000002521866
myo5b / myosin VB / Q9ULV0* / AC090227.1*ENSDARG0000006200359
myo5c / myosin VC / Q9NQX4*ENSDARG0000010423546
mbd3b / si:dkey-110c1.10ENSDARG0000006181030
myo7aa / myosin VIIAa / MYO7A* / Q13402* / myosin VIIA*ENSDARG0000009987124
myo7ab / myosin VIIAb / MYO7A* / P97479* / Q13402* / myosin VIIA* / Unconventional myosin-VIIa *ENSDARG0000004463224
si:ch73-194h10.2 / MYO7B* / Q6PIF6* / Q99MZ6* / myosin VIIB* / Unconventional myosin-VIIb *ENSDARG0000004444123
myo7bb / myosin VIIBb / MYO7B* / Q6PIF6* / Q99MZ6* / myosin VIIB* / Unconventional myosin-VIIb *ENSDARG0000007720123
myo9aa / myosin IXAa / MYO9A* / B2RTY4* / myosin IXA*ENSDARG0000007672922
myo10 / myosin X / F8VQB6* / Q9HD67* / Mus musculus myosin X (Myo10), transcript variant 3, mRNA.*ENSDARG0000001700421
MYO9B / si:zfos-588f8.1 / Q13459* / myosin IXB*ENSDARG0000007831321
myo9ab / myosin IXAb / MYO9A* / Q8C170* / B2RTY4* / myosin IXA* / Unconventional myosin-IXa *ENSDARG0000007384320
myo10l1 / myosin X-like 1ENSDARG0000007472320
myo9b / myosin IXb / Q13459*ENSDARG0000007741019
myo6a / myosin VIa / MYO6* / Q9UM54* / myosin VI*ENSDARG0000004401618
myo6b / myosin VIb / MYO6* / Q9UM54* / myosin VI*ENSDARG0000004214117
myo10l3 / myosin X-like 3ENSDARG000000741439


Protein motifs (from Interpro)
Interpro ID Name
 IPR000048  IQ motif, EF-hand binding site
 IPR001609  Myosin head, motor domain
 IPR002710  Dilute domain
 IPR008989  Myosin S1 fragment, N-terminal
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007018 microtubule-based movement IEA
 cellular_componentGO:0016459 myosin complex IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003774 motor activity IEA
 molecular_functionGO:0003777 microtubule motor activity IEA
 molecular_functionGO:0003779 actin binding IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0008017 microtubule binding IEA
 molecular_functionGO:0051015 actin filament binding IEA


Pathways (from Reactome)
Pathway description
Regulation of actin dynamics for phagocytic cup formation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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