ENSG00000197535


Homo sapiens

Features
Gene ID: ENSG00000197535
  
Biological name :MYO5A
  
Synonyms : MYO5A / myosin VA / Q9Y4I1
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 15
Strand: -1
Band: q21.2
Gene start: 52307283
Gene end: 52529050
  
Corresponding Affymetrix probe sets: 204527_at (Human Genome U133 Plus 2.0 Array)   217417_at (Human Genome U133 Plus 2.0 Array)   227761_at (Human Genome U133 Plus 2.0 Array)   241966_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000451178
Ensembl peptide - ENSP00000451109
Ensembl peptide - ENSP00000458016
Ensembl peptide - ENSP00000481420
Ensembl peptide - ENSP00000348693
Ensembl peptide - ENSP00000350945
Ensembl peptide - ENSP00000382174
Ensembl peptide - ENSP00000382175
Ensembl peptide - ENSP00000382177
Ensembl peptide - ENSP00000382179
NCBI entrez gene - 4644     See in Manteia.
OMIM - 160777
RefSeq - XM_017022227
RefSeq - NM_000259
RefSeq - NM_001142495
RefSeq - XM_005254397
RefSeq - XM_011521606
RefSeq - XM_011521607
RefSeq - XM_011521608
RefSeq - XM_011521609
RefSeq - XM_011521610
RefSeq - XM_011521611
RefSeq - XM_011521612
RefSeq Peptide - NP_001135967
RefSeq Peptide - NP_000250
swissprot - F8W6H6
swissprot - F8WE88
swissprot - G3V394
swissprot - G3V3C9
swissprot - Q9Y4I1
swissprot - A0A087WY00
swissprot - Q9UES5
swissprot - O95317
swissprot - E7ERV5
Ensembl - ENSG00000197535
  
Related genetic diseases (OMIM): 214450 - Griscelli syndrome, type 1, 214450
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 myo5aaENSDARG00000061635Danio rerio
 myo5abENSDARG00000025218Danio rerio
 MYO5AENSGALG00000031987Gallus gallus
 Myo5aENSMUSG00000034593Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
MYO5B / Q9ULV0 / myosin VBENSG0000016730663
MYO5C / Q9NQX4 / myosin VCENSG0000012883351
MYO7A / Q13402 / myosin VIIAENSG0000013747425
MYO7B / Q6PIF6 / myosin VIIBENSG0000016999425
MYO9A / B2RTY4 / myosin IXAENSG0000006693323
MYO9B / Q13459 / myosin IXBENSG0000009933122
MYO10 / Q9HD67 / myosin XENSG0000014555521
MYO6 / Q9UM54 / myosin VIENSG0000019658619
AC090227.1ENSG000002669977


Protein motifs (from Interpro)
Interpro ID Name
 IPR000048  IQ motif, EF-hand binding site
 IPR001609  Myosin head, motor domain
 IPR002710  Dilute domain
 IPR027417  P-loop containing nucleoside triphosphate hydrolase
 IPR036103  Class V myosin, motor domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006582 melanin metabolic process IEA
 biological_processGO:0006887 exocytosis IEA
 biological_processGO:0006892 post-Golgi vesicle-mediated transport IMP
 biological_processGO:0007018 microtubule-based movement IEA
 biological_processGO:0007268 chemical synaptic transmission IEA
 biological_processGO:0007601 visual perception IEA
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0016192 vesicle-mediated transport ISS
 biological_processGO:0030048 actin filament-based movement NAS
 biological_processGO:0030050 vesicle transport along actin filament IMP
 biological_processGO:0030073 insulin secretion IEA
 biological_processGO:0030318 melanocyte differentiation IEA
 biological_processGO:0031585 regulation of inositol 1,4,5-trisphosphate-sensitive calcium-release channel activity IEA
 biological_processGO:0031987 locomotion involved in locomotory behavior IEA
 biological_processGO:0032252 secretory granule localization IEA
 biological_processGO:0032400 melanosome localization IEA
 biological_processGO:0032402 melanosome transport NAS
 biological_processGO:0032869 cellular response to insulin stimulus ISS
 biological_processGO:0042438 melanin biosynthetic process IEA
 biological_processGO:0042476 odontogenesis IEA
 biological_processGO:0042552 myelination IEA
 biological_processGO:0042759 long-chain fatty acid biosynthetic process IEA
 biological_processGO:0043473 pigmentation IEA
 biological_processGO:0048066 developmental pigmentation IEA
 biological_processGO:0048820 hair follicle maturation IEA
 biological_processGO:0050808 synapse organization IEA
 biological_processGO:0051643 endoplasmic reticulum localization IEA
 biological_processGO:0072659 protein localization to plasma membrane ISS
 biological_processGO:0099089 establishment of endoplasmic reticulum localization to postsynapse IEA
 cellular_componentGO:0001726 ruffle IDA
 cellular_componentGO:0001750 photoreceptor outer segment IEA
 cellular_componentGO:0005737 cytoplasm IDA
 cellular_componentGO:0005764 lysosome IDA
 cellular_componentGO:0005769 early endosome IDA
 cellular_componentGO:0005770 late endosome IDA
 cellular_componentGO:0005777 peroxisome IDA
 cellular_componentGO:0005783 endoplasmic reticulum IDA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0005829 cytosol IDA
 cellular_componentGO:0005882 intermediate filament IEA
 cellular_componentGO:0005884 actin filament IDA
 cellular_componentGO:0016020 membrane IDA
 cellular_componentGO:0016459 myosin complex IEA
 cellular_componentGO:0016461 unconventional myosin complex IEA
 cellular_componentGO:0030141 secretory granule IEA
 cellular_componentGO:0030426 growth cone NAS
 cellular_componentGO:0031982 vesicle IDA
 cellular_componentGO:0032433 filopodium tip IDA
 cellular_componentGO:0032593 insulin-responsive compartment ISS
 cellular_componentGO:0035371 microtubule plus-end IEA
 cellular_componentGO:0042470 melanosome IDA
 cellular_componentGO:0042641 actomyosin IEA
 cellular_componentGO:0043005 neuron projection NAS
 cellular_componentGO:0043025 neuronal cell body IEA
 cellular_componentGO:0055037 recycling endosome IDA
 cellular_componentGO:0070062 extracellular exosome HDA
 molecular_functionGO:0000146 microfilament motor activity NAS
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003723 RNA binding HDA
 molecular_functionGO:0003774 motor activity IEA
 molecular_functionGO:0003777 microtubule motor activity IEA
 molecular_functionGO:0003779 actin binding IEA
 molecular_functionGO:0005509 calcium ion binding IEA
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0005516 calmodulin binding IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0008017 microtubule binding IEA
 molecular_functionGO:0017137 Rab GTPase binding IPI
 molecular_functionGO:0042802 identical protein binding IEA
 molecular_functionGO:0051015 actin filament binding IEA
 molecular_functionGO:0097718 disordered domain specific binding IEA


Pathways (from Reactome)
Pathway description
Translocation of SLC2A4 (GLUT4) to the plasma membrane
Regulation of actin dynamics for phagocytic cup formation
Insulin processing


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000486 Strabismus "Strabismus (also known as squint) is a condition in which the eyes are not properly aligned with each other." [HPO:curators]
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 HP:0000488 Retinopathy 
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 HP:0000545 Myopia 
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 HP:0000639 Nystagmus "Rhythmic, involuntary oscillations of one or both eyes related to abnormality in fixation, conjugate gaze, or vestibular mechanisms." [HPO:curators]
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 HP:0000648 Optic atrophy 
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 HP:0000651 Diplopia "Diplopia is a condition in which a single object is perceived as two images, it is also known as double vision." [HPO:curators]
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 HP:0001008 Accumulation of melanosomes in melanocytes 
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 HP:0001010 Hypopigmentation of the skin 
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 HP:0001249 Mental retardation 
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 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
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 HP:0001251 Ataxia "Ataxia is a nonspecific neurological sign and symptom consisting of gross lack of coordination of muscle movements. Ataxia is caused by dysfunction of one or more parts of the nervous system including the cerebellum, the sensory nervous system, the vestibular system, or the cerebral cortex." [HPO:curators]
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 HP:0001252 Muscular hypotonia "Muscular hypotonia is an abnormally low muscle tone (the amount of tension or resistance to movement in a muscle), often involving reduced muscle strength. Hypotonia is characterized by a diminished resistance to passive stretching." [HPO:curators]
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 HP:0001257 Spasticity "A motor disorder characterized by a velocity-dependent increase in tonic stretch reflexes with increased muscle tone, exaggerated (hyperexcitable) tendon reflexes." [HPO:curators]
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 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
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 HP:0001276 Hypertonia 
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 HP:0001290 Generalized hypotonia "Generalized muscular hypotonia (abnormally low muscle tone)." [HPO:curators]
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 HP:0001321 Cerebellar hypoplasia 
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 HP:0001328 Learning disability 
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 HP:0001337 Tremor "An unintentional, oscillating to-and-fro muscle movement." [HPO:curators]
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 HP:0002063 Rigidity 
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 HP:0002205 Recurrent respiratory infections 
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 HP:0002216 Premature graying of hair 
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 HP:0002218 Silver-gray hair 
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 HP:0002220 Melanin pigment aggregation in hair shafts 
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 HP:0002334 Abnormality of the cerebellar vermis 
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 HP:0002514 Cerebral calcification "The presence of calcification within brain structures." [HPO:curators]
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 HP:0003077 Hyperlipidemia 
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 HP:0003552 Muscle stiffness 
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 HP:0003593 Early onset 
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 HP:0005599 Hair hypopigmentation 
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 HP:0007440 Generalized hyperpigmentation 
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 HP:0007443 Partial albinism 
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 HP:0007730 Reduced iris pigmentation 
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 HP:0007754 Macular dystrophy 
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 HP:0008059 Aplasia/Hypoplasia of the macula 
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 HP:0011364 White hair "Hypopigmented hair that appears white." [DDD:cmoss]
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 HP:0012157 Subcortical cerebral atrophy "Atrophy of the cerebral subcortical white and gray matter, termed subcortical atrophy, reflects loss of nerve cells in the basal ganglia or fibers in the deep white matter." [HPO:probinson, pmid:20813998]
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 HP:0100022 Abnormality of movement "An abnormality of movement with a neurological basis characterized by changes in coordination and speed of voluntary movements." [HPO:probinson]
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 HP:0100308 Cerebral cortical hemiatrophy 
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000105221 AKT2 / P31751 / AKT serine/threonine kinase 2  / reaction
 ENSG00000069974 P51159 / RAB27A / RAB27A, member RAS oncogene family  / complex
 ENSG00000197535 MYO5A / Q9Y4I1 / myosin VA  / complex
 ENSG00000170011 MYRIP / Q8NFW9 / myosin VIIA and Rab interacting protein  / complex






 

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