ENSG00000196586


Homo sapiens

Features
Gene ID: ENSG00000196586
  
Biological name :MYO6
  
Synonyms : MYO6 / myosin VI / Q9UM54
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 6
Strand: 1
Band: q14.1
Gene start: 75749192
Gene end: 75919537
  
Corresponding Affymetrix probe sets: 203215_s_at (Human Genome U133 Plus 2.0 Array)   203216_s_at (Human Genome U133 Plus 2.0 Array)   210480_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000359002
Ensembl peptide - ENSP00000358998
Ensembl peptide - ENSP00000399406
Ensembl peptide - ENSP00000487348
Ensembl peptide - ENSP00000478013
Ensembl peptide - ENSP00000358992
Ensembl peptide - ENSP00000358994
NCBI entrez gene - 4646     See in Manteia.
OMIM - 600970
RefSeq - XM_017010899
RefSeq - NM_004999
RefSeq - XM_005248719
RefSeq - XM_005248720
RefSeq - XM_005248721
RefSeq - XM_005248722
RefSeq - XM_005248724
RefSeq - XM_005248726
RefSeq - NM_001300899
RefSeq Peptide - NP_004990
RefSeq Peptide - NP_001287828
swissprot - Q9UM54
swissprot - E7EW20
swissprot - Q5JVM0
swissprot - A0A0A0MRM8
swissprot - A0A0D9SGC1
Ensembl - ENSG00000196586
  
Related genetic diseases (OMIM): 606346 - Deafness, autosomal dominant 22, 606346
  607821 - Deafness, autosomal recessive 37, 607821
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 myo6aENSDARG00000044016Danio rerio
 myo6bENSDARG00000042141Danio rerio
 MYO6ENSGALG00000015898Gallus gallus
 Myo6ENSMUSG00000033577Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
MYO9A / B2RTY4 / myosin IXAENSG0000006693327
MYO5A / Q9Y4I1 / myosin VAENSG0000019753527
MYO7B / Q6PIF6 / myosin VIIBENSG0000016999427
MYO10 / Q9HD67 / myosin XENSG0000014555526
MYO5C / Q9NQX4 / myosin VCENSG0000012883326
MYO5B / Q9ULV0 / myosin VBENSG0000016730626
MYO7A / Q13402 / myosin VIIAENSG0000013747426
MYO9B / Q13459 / myosin IXBENSG0000009933125
AC090227.1ENSG000002669970


Protein motifs (from Interpro)
Interpro ID Name
 IPR001609  Myosin head, motor domain
 IPR027417  P-loop containing nucleoside triphosphate hydrolase
 IPR032412  Myosin VI, cargo binding domain
 IPR036114  Class VI myosin, motor domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006886 intracellular protein transport ISS
 biological_processGO:0006897 endocytosis ISS
 biological_processGO:0007018 microtubule-based movement IEA
 biological_processGO:0007605 sensory perception of sound IEA
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0030048 actin filament-based movement NAS
 biological_processGO:0030330 DNA damage response, signal transduction by p53 class mediator IDA
 biological_processGO:0042493 response to drug IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IMP
 biological_processGO:0051046 regulation of secretion IMP
 cellular_componentGO:0001726 ruffle IDA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IDA
 cellular_componentGO:0005737 cytoplasm ISS
 cellular_componentGO:0005765 lysosomal membrane TAS
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0005829 cytosol TAS
 cellular_componentGO:0005886 plasma membrane TAS
 cellular_componentGO:0005902 microvillus IEA
 cellular_componentGO:0005905 clathrin-coated pit IEA
 cellular_componentGO:0005938 cell cortex ISS
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016459 myosin complex IEA
 cellular_componentGO:0016461 unconventional myosin complex TAS
 cellular_componentGO:0016591 DNA-directed RNA polymerase II, holoenzyme IDA
 cellular_componentGO:0030139 endocytic vesicle ISS
 cellular_componentGO:0030665 clathrin-coated vesicle membrane IEA
 cellular_componentGO:0031410 cytoplasmic vesicle IEA
 cellular_componentGO:0031941 filamentous actin ISS
 cellular_componentGO:0031965 nuclear membrane IDA
 cellular_componentGO:0032587 ruffle membrane IEA
 cellular_componentGO:0042995 cell projection IEA
 cellular_componentGO:0043231 intracellular membrane-bounded organelle IEA
 cellular_componentGO:0045177 apical part of cell IEA
 cellular_componentGO:0045334 clathrin-coated endocytic vesicle IDA
 cellular_componentGO:0048471 perinuclear region of cytoplasm ISS
 cellular_componentGO:0070062 extracellular exosome HDA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003774 motor activity IEA
 molecular_functionGO:0003777 microtubule motor activity IEA
 molecular_functionGO:0003779 actin binding IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0005516 calmodulin binding TAS
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0008017 microtubule binding IEA
 molecular_functionGO:0043531 ADP binding ISS
 molecular_functionGO:0045296 cadherin binding IDA
 molecular_functionGO:0051015 actin filament binding IEA
 molecular_functionGO:0060001 minus-end directed microfilament motor activity NAS


Pathways (from Reactome)
Pathway description
Gap junction degradation
Trafficking of AMPA receptors


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
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 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000408 Hearing loss, sensorineural, progressive 
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 HP:0000510 Retinitis pigmentosa "Hereditary degeneration and atrophy of the retina." [HPO:curators]
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 HP:0001751 Vestibular dysfunction 
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 HP:0007642 Congenital stationary night blindness 
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 HP:0008619 Hearing loss, sensorineural, bilateral 
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000161203 AP2M1 / Q96CW1 / adaptor related protein complex 2 mu 1 subunit  / reaction / complex
 ENSG00000153071 DAB2 / P98082 / DAB2, clathrin adaptor protein  / reaction / complex






 

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