ENSDARG00000077410


Danio rerio

Features
Gene ID: ENSDARG00000077410
  
Biological name :myo9b
  
Synonyms : myo9b / myosin IXb
  
Possible biological names infered from orthology : Q13459
  
Species: Danio rerio
  
Chr. number: 2
Strand: -1
Band:
Gene start: 37684922
Gene end: 37744951
  
Corresponding Affymetrix probe sets: Dr.4876.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000082473
Ensembl peptide - ENSDARP00000152040
Ensembl peptide - ENSDARP00000112855
NCBI entrez gene - 560956     See in Manteia.
RefSeq - XM_009298663
RefSeq - XM_009298664
RefSeq - XM_017351952
swissprot - E9QDU2
swissprot - E7FFP7
ZFIN ID - ZDB-GENE-030131-938
Ensembl - ENSDARG00000077410
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 MYO9BENSGALG00000003717Gallus gallus
 MYO9BENSG00000099331Homo sapiens
 Myo9bENSMUSG00000004677Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
MYO9B / si:zfos-588f8.1 / Q13459* / myosin IXB*ENSDARG0000007831354
myo9aa / myosin IXAa / MYO9A* / B2RTY4* / myosin IXA*ENSDARG0000007672942
myo9ab / myosin IXAb / MYO9A* / Q8C170* / B2RTY4* / myosin IXA* / Unconventional myosin-IXa *ENSDARG0000007384338
myo7ab / myosin VIIAb / MYO7A* / P97479* / Q13402* / myosin VIIA* / Unconventional myosin-VIIa *ENSDARG0000004463220
si:ch73-194h10.2 / MYO7B* / Q6PIF6* / Q99MZ6* / myosin VIIB* / Unconventional myosin-VIIb *ENSDARG0000004444120
myo7aa / myosin VIIAa / MYO7A* / Q13402* / myosin VIIA*ENSDARG0000009987120
myo10l1 / myosin X-like 1ENSDARG0000007472319
myo7bb / myosin VIIBb / MYO7B* / Q6PIF6* / Q99MZ6* / myosin VIIB* / Unconventional myosin-VIIb *ENSDARG0000007720119
myo5ab / myosin VAb / MYO5A* / Q99104* / Q9Y4I1* / myosin VA* / Unconventional myosin-Va *ENSDARG0000002521818
myo5aa / myosin VAa / MYO5A* / Q99104* / Q9Y4I1* / myosin VA* / Unconventional myosin-Va *ENSDARG0000006163518
myo10 / myosin X / F8VQB6* / Q9HD67* / Mus musculus myosin X (Myo10), transcript variant 3, mRNA.*ENSDARG0000001700418
myo5c / myosin VC / Q9NQX4*ENSDARG0000010423517
myo5b / myosin VB / Q9ULV0* / AC090227.1*ENSDARG0000006200317
myo6b / myosin VIb / MYO6* / Q9UM54* / myosin VI*ENSDARG0000004214115
myo6a / myosin VIa / MYO6* / Q9UM54* / myosin VI*ENSDARG0000004401615
mbd3b / si:dkey-110c1.10ENSDARG0000006181013
myo10l3 / myosin X-like 3ENSDARG000000741437


Protein motifs (from Interpro)
Interpro ID Name
 IPR000159  Ras-associating (RA) domain
 IPR000198  Rho GTPase-activating protein domain
 IPR001609  Myosin head, motor domain
 IPR002219  Protein kinase C-like, phorbol ester/diacylglycerol-binding domain
 IPR008936  Rho GTPase activation protein
 IPR027417  P-loop containing nucleoside triphosphate hydrolase
 IPR028557  Unconventional myosin-IXb
 IPR029071  Ubiquitin-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007018 microtubule-based movement IEA
 biological_processGO:0007165 signal transduction IEA
 biological_processGO:0035556 intracellular signal transduction IEA
 biological_processGO:0043547 positive regulation of GTPase activity IEA
 cellular_componentGO:0016459 myosin complex IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003774 motor activity IEA
 molecular_functionGO:0003777 microtubule motor activity IEA
 molecular_functionGO:0003779 actin binding IEA
 molecular_functionGO:0005096 GTPase activator activity IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0008017 microtubule binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Rho GTPase cycle
Regulation of actin dynamics for phagocytic cup formation
SLIT2:ROBO1 increases RHOA activity


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000004246 slit2 / slit homolog 2 (Drosophila) / O94813* / Q9R1B9* / slit guidance ligand 2*  / reaction / complex
 ENSDARG00000094673 rhoab / Q6DHM9 / ras homolog gene family, member Ab / RHOA* / Q9QUI0* / P61586* / ras homolog family member A*  / reaction






 

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