ENSDARG00000104235


Danio rerio

Features
Gene ID: ENSDARG00000104235
  
Biological name :myo5c
  
Synonyms : myo5c / myosin VC
  
Possible biological names infered from orthology : Q9NQX4
  
Species: Danio rerio
  
Chr. number: 25
Strand: 1
Band:
Gene start: 4787431
Gene end: 4833624
  
Corresponding Affymetrix probe sets: Dr.3652.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000139984
Ensembl peptide - ENSDARP00000150688
Ensembl peptide - ENSDARP00000141899
NCBI entrez gene - 562676     See in Manteia.
RefSeq - XM_686051
swissprot - E7FCI5
swissprot - A0A0R4IX49
ZFIN ID - ZDB-GENE-131127-196
Ensembl - ENSDARG00000104235
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 MYO5CENSGALG00000033198Gallus gallus
 MYO5CENSG00000128833Homo sapiens
 Myo5cENSMUSG00000033590Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
myo5b / myosin VB / Q9ULV0* / AC090227.1*ENSDARG0000006200349
myo5aa / myosin VAa / MYO5A* / Q99104* / Q9Y4I1* / myosin VA* / Unconventional myosin-Va *ENSDARG0000006163549
myo5ab / myosin VAb / MYO5A* / Q99104* / Q9Y4I1* / myosin VA* / Unconventional myosin-Va *ENSDARG0000002521848
mbd3b / si:dkey-110c1.10ENSDARG0000006181029
myo7aa / myosin VIIAa / MYO7A* / Q13402* / myosin VIIA*ENSDARG0000009987125
si:ch73-194h10.2 / MYO7B* / Q6PIF6* / Q99MZ6* / myosin VIIB* / Unconventional myosin-VIIb *ENSDARG0000004444125
myo7ab / myosin VIIAb / MYO7A* / P97479* / Q13402* / myosin VIIA* / Unconventional myosin-VIIa *ENSDARG0000004463225
myo7bb / myosin VIIBb / MYO7B* / Q6PIF6* / Q99MZ6* / myosin VIIB* / Unconventional myosin-VIIb *ENSDARG0000007720124
myo9aa / myosin IXAa / MYO9A* / B2RTY4* / myosin IXA*ENSDARG0000007672922
myo9ab / myosin IXAb / MYO9A* / Q8C170* / B2RTY4* / myosin IXA* / Unconventional myosin-IXa *ENSDARG0000007384321
MYO9B / si:zfos-588f8.1 / Q13459* / myosin IXB*ENSDARG0000007831321
myo9b / myosin IXb / Q13459*ENSDARG0000007741020
myo10 / myosin X / F8VQB6* / Q9HD67* / Mus musculus myosin X (Myo10), transcript variant 3, mRNA.*ENSDARG0000001700420
myo10l1 / myosin X-like 1ENSDARG0000007472320
myo6b / myosin VIb / MYO6* / Q9UM54* / myosin VI*ENSDARG0000004214118
myo6a / myosin VIa / MYO6* / Q9UM54* / myosin VI*ENSDARG0000004401618
myo10l3 / myosin X-like 3ENSDARG000000741438


Protein motifs (from Interpro)
Interpro ID Name
 IPR000048  IQ motif, EF-hand binding site
 IPR001609  Myosin head, motor domain
 IPR002710  Dilute domain
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007018 microtubule-based movement IEA
 cellular_componentGO:0016459 myosin complex IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003774 motor activity IEA
 molecular_functionGO:0003777 microtubule motor activity IEA
 molecular_functionGO:0003779 actin binding IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0008017 microtubule binding IEA
 molecular_functionGO:0051015 actin filament binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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