ENSMUSG00000033590


Mus musculus

Features
Gene ID: ENSMUSG00000033590
  
Biological name :Myo5c
  
Synonyms : Myo5c / myosin VC
  
Possible biological names infered from orthology : Q9NQX4
  
Species: Mus musculus
  
Chr. number: 9
Strand: 1
Band: D
Gene start: 75232020
Gene end: 75305451
  
Corresponding Affymetrix probe sets: 10587150 (MoGene1.0st)   1424933_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000150730
Ensembl peptide - ENSMUSP00000042229
NCBI entrez gene - 208943     See in Manteia.
MGI - MGI:2442485
RefSeq - XM_011242693
RefSeq - XM_006510937
RefSeq - XM_006510939
RefSeq - XM_006510940
RefSeq - NM_001081322
RefSeq - XM_006510935
RefSeq - XM_006510936
RefSeq Peptide - NP_001074791
swissprot - E9Q1F5
swissprot - A0A1L1SUF0
Ensembl - ENSMUSG00000033590
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 myo5cENSDARG00000104235Danio rerio
 MYO5CENSGALG00000033198Gallus gallus
 MYO5CENSG00000128833Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Myo5a / Q99104 / Unconventional myosin-Va / Q9Y4I1* / myosin VA*ENSMUSG0000003459353
Myo5b / myosin VB / Q9ULV0*ENSMUSG0000002588551
Myo7a / P97479 / Unconventional myosin-VIIa / Q13402* / myosin VIIA*ENSMUSG0000003076125
Myo7b / Q99MZ6 / Unconventional myosin-VIIb / Q6PIF6* / myosin VIIB*ENSMUSG0000002438825
Myo9a / Q8C170 / Unconventional myosin-IXa / B2RTY4* / myosin IXA*ENSMUSG0000003958524
Myo9b / myosin IXB / Q13459*ENSMUSG0000000467723
Myo10 / F8VQB6 / Mus musculus myosin X (Myo10), transcript variant 3, mRNA. / Q9HD67* / myosin X*ENSMUSG0000002227221
Myo6 / myosin VI / Q9UM54*ENSMUSG0000003357719


Protein motifs (from Interpro)
Interpro ID Name
 IPR000048  IQ motif, EF-hand binding site
 IPR001609  Myosin head, motor domain
 IPR002710  Dilute domain
 IPR027417  P-loop containing nucleoside triphosphate hydrolase
 IPR036103  Class V myosin, motor domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007018 microtubule-based movement IEA
 biological_processGO:0032254 establishment of secretory granule localization ISO
 cellular_componentGO:0016459 myosin complex IEA
 cellular_componentGO:0030141 secretory granule ISO
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003674 molecular_function ND
 molecular_functionGO:0003774 motor activity IEA
 molecular_functionGO:0003777 microtubule motor activity IEA
 molecular_functionGO:0003779 actin binding IEA
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0008017 microtubule binding IEA
 molecular_functionGO:0051015 actin filament binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr