ENSDARG00000070463


Danio rerio

Features
Gene ID: ENSDARG00000070463
  
Biological name :e2f3
  
Synonyms : e2f3 / E2F transcription factor 3
  
Possible biological names infered from orthology : O00716 / O35261 / Transcription factor E2F3
  
Species: Danio rerio
  
Chr. number: 19
Strand: -1
Band:
Gene start: 29274385
Gene end: 29294457
  
Corresponding Affymetrix probe sets: Dr.2722.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000094213
Ensembl peptide - ENSDARP00000109781
NCBI entrez gene - 791146     See in Manteia.
RefSeq - NM_001080628
RefSeq Peptide - NP_001074097
swissprot - B8JLN4
swissprot - A1L225
ZFIN ID - ZDB-GENE-070112-882
Ensembl - ENSDARG00000070463
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 E2F3ENSGALG00000012680Gallus gallus
 E2F3ENSG00000112242Homo sapiens
 E2f3ENSMUSG00000016477Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
E2F2 / si:ch211-160f23.5 / P56931* / Q14209* / E2F transcription factor 2* / Transcription factor E2F2 *ENSDARG0000007923340
e2f1 / E2F transcription factor 1 / Q01094*ENSDARG0000010386834
e2f4 / E2F transcription factor 4 / Q16254*ENSDARG0000010157824
e2f5 / E2F transcription factor 5 / Q15329* / Q61502* / Transcription factor E2F5 *ENSDARG0000003881223
si:ch211-195d17.2 / E2F6* / O54917* / O75461* / E2F transcription factor 6* / Transcription factor E2F6 *ENSDARG0000000811915


Protein motifs (from Interpro)
Interpro ID Name
 IPR003316  E2F/DP family, winged-helix DNA-binding domain
 IPR011991  ArsR-like helix-turn-helix domain
 IPR015633  E2F Family
 IPR032198  E2F transcription factor, CC-MB domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005667 transcription factor complex IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0046983 protein dimerization activity IEA


Pathways (from Reactome)
Pathway description
CDC6 association with the ORC:origin complex
G2 Phase
Cyclin D associated events in G1


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0001094 whole organism whole organism increased weight , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000026577 cdk2 / cyclin-dependent kinase 2 / P24941* / P97377*  / complex / reaction
 ENSDARG00000019293 tfdp1a / transcription factor Dp-1, a / TFDP1* / TFDP3* / Q14186* / Q5H9I0* / Q08639* / transcription factor Dp-1* / transcription factor Dp family member 3*  / complex






 

1 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr