ENSDARG00000078378


Danio rerio

Features
Gene ID: ENSDARG00000078378
  
Biological name :unm_sa808
  
Synonyms : unm_sa808 / un-named sa808
  
Possible biological names infered from orthology : P39429 / Q12933 / TNF receptor associated factor 2 / TRAF2
  
Species: Danio rerio
  
Chr. number: 5
Strand: 1
Band:
Gene start: 5689476
Gene end: 5696173
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000016657
swissprot - E7F5X7
ZFIN ID - ZDB-GENE-120727-21
Ensembl - ENSDARG00000078378
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TRAF2ENSGALG00000042838Gallus gallus
 TRAF2ENSG00000127191Homo sapiens
 Traf2ENSMUSG00000026942Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
traf2a / Tnf receptor-associated factor 2a / TRAF2* / P39429* / Q12933* / TNF receptor associated factor 2*ENSDARG0000003017384
traf2b / Tnf receptor-associated factor 2bENSDARG0000010103667
traf1 / TNF receptor-associated factor 1 / P39428* / Q13077*ENSDARG0000006948243
traf3 / TNF receptor-associated factor 3 / Q13114* / Q60803*ENSDARG0000002200041
traf4a / tnf receptor-associated factor 4a / TRAF4* / Q61382* / Q9BUZ4* / TNF receptor associated factor 4*ENSDARG0000000396326
traf4b / tnf receptor-associated factor 4bENSDARG0000003896425
traf6 / Q6IWL4 / TNF receptor-associated factor 6 / P70196* / Q9Y4K3*ENSDARG0000002805822
traf5 / Tnf receptor-associated factor 5 / O00463*ENSDARG000000172406


Protein motifs (from Interpro)
Interpro ID Name
 IPR002083  MATH/TRAF domain
 IPR008974  TRAF-like
 IPR027133  TNF receptor-associated factor 2
 IPR032070  TNF receptor-associated factor, BIRC3 binding domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007165 signal transduction IEA
 biological_processGO:0042981 regulation of apoptotic process IEA
 molecular_functionGO:0008270 zinc ion binding IEA


Pathways (from Reactome)
Pathway description
Regulation by c-FLIP
RIPK1-mediated regulated necrosis
CASP8 activity is inhibited
TNFR1-induced proapoptotic signaling
Regulation of TNFR1 signaling
TNFR1-induced NFkappaB signaling pathway
TNFR2 non-canonical NF-kB pathway
TNF receptor superfamily (TNFSF) members mediating non-canonical NF-kB pathway
Ub-specific processing proteases
Dimerization of procaspase-8
TNF signaling


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr