ENSDARG00000069482


Danio rerio

Features
Gene ID: ENSDARG00000069482
  
Biological name :traf1
  
Synonyms : TNF receptor-associated factor 1 / traf1
  
Possible biological names infered from orthology : P39428 / Q13077
  
Species: Danio rerio
  
Chr. number: 8
Strand: -1
Band:
Gene start: 12408840
Gene end: 12432685
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000091948
Ensembl peptide - ENSDARP00000120456
Ensembl peptide - ENSDARP00000114771
NCBI entrez gene - 100148503     See in Manteia.
RefSeq - NM_001128381
RefSeq Peptide - NP_001121853
swissprot - B0UXK3
swissprot - B0UXK1
swissprot - F1QDI5
ZFIN ID - ZDB-GENE-071120-4
Ensembl - ENSDARG00000069482
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TRAF1ENSGALG00000001583Gallus gallus
 TRAF1ENSG00000056558Homo sapiens
 Traf1ENSMUSG00000026875Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
traf2b / Tnf receptor-associated factor 2bENSDARG0000010103633
traf2a / Tnf receptor-associated factor 2a / TRAF2* / P39429* / Q12933* / TNF receptor associated factor 2*ENSDARG0000003017333
traf3 / TNF receptor-associated factor 3 / Q13114* / Q60803*ENSDARG0000002200028
traf6 / Q6IWL4 / TNF receptor-associated factor 6 / P70196* / Q9Y4K3*ENSDARG0000002805823
unm_sa808 / un-named sa808 / TRAF2* / Q12933* / TNF receptor associated factor 2*ENSDARG0000007837822
traf4a / tnf receptor-associated factor 4a / TRAF4* / Q61382* / Q9BUZ4* / TNF receptor associated factor 4*ENSDARG0000000396321
traf4b / tnf receptor-associated factor 4bENSDARG0000003896420
traf5 / Tnf receptor-associated factor 5 / O00463*ENSDARG0000001724011


Protein motifs (from Interpro)
Interpro ID Name
 IPR001293  Zinc finger, TRAF-type
 IPR001841  Zinc finger, RING-type
 IPR002083  MATH/TRAF domain
 IPR008974  TRAF-like
 IPR012227  TNF receptor-associated factor TRAF
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR017907  Zinc finger, RING-type, conserved site
 IPR027128  TNF receptor-associated factor 3
 IPR032070  TNF receptor-associated factor, BIRC3 binding domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007165 signal transduction IEA
 biological_processGO:0042981 regulation of apoptotic process IEA
 molecular_functionGO:0005164 tumor necrosis factor receptor binding IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Regulation of TNFR1 signaling
TNFR1-induced NFkappaB signaling pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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