ENSDARG00000088072


Danio rerio

Features
Gene ID: ENSDARG00000088072
  
Biological name :usp43b
  
Synonyms : ubiquitin specific peptidase 43b / usp43b
  
Possible biological names infered from orthology : Q70EL4 / Q8BUM9 / ubiquitin specific peptidase 43 / USP43
  
Species: Danio rerio
  
Chr. number: 3
Strand: -1
Band:
Gene start: 25546672
Gene end: 25646149
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000106880
NCBI entrez gene - 100149276     See in Manteia.
swissprot - E7FD00
ZFIN ID - ZDB-GENE-120524-2
Ensembl - ENSDARG00000088072
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000037812Gallus gallus
 USP43ENSG00000154914Homo sapiens
 Usp43ENSMUSG00000020905Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
usp43a / ubiquitin specific peptidase 43a / USP43* / Q70EL4* / Q8BUM9* / ubiquitin specific peptidase 43*ENSDARG0000010349453
usp31 / ubiquitin specific peptidase 31 / Q70CQ4*ENSDARG0000007401737
usp11 / ubiquitin specific peptidase 11 / P51784* / Q99K46*ENSDARG0000007630317
usp4 / ubiquitin specific peptidase 4 (proto-oncogene) / P35123* / Q13107* / ubiquitin specific peptidase 4*ENSDARG0000001477017
usp19 / ubiquitin specific peptidase 19 / O94966* / Q3UJD6*ENSDARG0000000413216
usp32 / ubiquitin specific peptidase 32 / USP6* / Q8NFA0* / P35125* / ubiquitin specific peptidase 6*ENSDARG0000006189515


Protein motifs (from Interpro)
Interpro ID Name
 IPR001394  Peptidase C19, ubiquitin carboxyl-terminal hydrolase
 IPR018200  Ubiquitin specific protease, conserved site
 IPR028889  Ubiquitin specific protease domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006511 ubiquitin-dependent protein catabolic process IEA
 biological_processGO:0016579 protein deubiquitination IEA
 cellular_componentGO:0005634 nucleus IBA
 molecular_functionGO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEA


Pathways (from Reactome)
Pathway description
Termination of translesion DNA synthesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000003938 rpa1 / Q6NY74 / replication protein A1 / Q8VEE4* / P27694* / Replication protein A 70 kDa DNA-binding subunit *  / reaction / complex
 ENSDARG00000037188 rpa2 / replication protein A2 / RPA4* / Q13156* / P15927* / replication protein A4*  / complex / reaction
 ENSDARG00000086374 isg15 / ISG15 ubiquitin-like modifier / P05161* / Q64339* / Ubiquitin-like protein ISG15 *  / reaction / complex
 ENSDARG00000054155 pcna / Q9PTP1 / proliferating cell nuclear antigen / P17918* / P12004* / Pcna-ps2*  / reaction / complex






 

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