ENSDARG00000088701


Danio rerio

Features
Gene ID: ENSDARG00000088701
  
Biological name :tlr20.2
  
Synonyms : tlr20.2 / tlr20.4 / toll-like receptor 20, tandem duplicate 2
  
Possible biological names infered from orthology : Q6R5N8 / Tlr13 / Toll-like receptor 13
  
Species: Danio rerio
  
Chr. number: 9
Strand: 1
Band:
Gene start: 27352298
Gene end: 27355333
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000108970
Ensembl peptide - ENSDARP00000123133
Ensembl peptide - ENSDARP00000135462
NCBI entrez gene - 403140     See in Manteia.
RefSeq - NM_001177443
RefSeq Peptide - NP_001170914
swissprot - F1QFI1
swissprot - B3DKB1
swissprot - F1QRG0
ZFIN ID - ZDB-GENE-040220-6
ZFIN ID - ZDB-GENE-071002-1
Ensembl - ENSDARG00000088701
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Tlr13ENSMUSG00000033777Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
senp7a / SUMO1/sentrin specific peptidase 7a / Tlr13* / Q6R5N8* / Toll-like receptor 13 *ENSDARG0000010952246
senp7a / SUMO1/sentrin specific peptidase 7a / Tlr13* / Q6R5N8* / Toll-like receptor 13 *ENSDARG0000011513646
tlr19 / toll-like receptor 19 / Tlr13* / Q6R5N8* / Toll-like receptor 13 *ENSDARG0000007039225
tlr21 / toll-like receptor 21ENSDARG0000005804524
tlr20.3 / tlr20.4 / toll-like receptor 20, tandem duplicate 4 / Tlr13* / Q6R5N8* / Toll-like receptor 13 *ENSDARG0000009266823
tlr19 / toll-like receptor 19 / Tlr13* / Q6R5N8* / Toll-like receptor 13 *ENSDARG0000002666323
tlr22 / toll-like receptor 22ENSDARG0000010404522
tlr20.1 / toll-like receptor 20, tandem duplicate 1 / Tlr13* / Q6R5N8* / Toll-like receptor 13 *ENSDARG0000011592318
tlr20.3 / toll-like receptor 20, tandem duplicate 3 / Tlr13* / Q6R5N8* / Toll-like receptor 13 *ENSDARG0000011405717
tlr4bb / toll-like receptor 4b, duplicate b / TLR4* / Q9QUK6* / O00206* / toll like receptor 4*ENSDARG0000002204816
tlr3 / toll-like receptor 3 / O15455* / Q99MB1* / Mus musculus toll-like receptor 3 (Tlr3), transcript variant 3, mRNA.*ENSDARG0000001606516
tlr7 / toll-like receptor 7 / Q9NYK1*ENSDARG0000006881215
tlr5b / toll-like receptor 5b / TLR5* / O60602* / toll like receptor 5*ENSDARG0000005232215
tlr4al / toll-like receptor 4a, like / TLR4* / Q9QUK6* / O00206* / toll like receptor 4*ENSDARG0000007567115
tlr18 / toll-like receptor 18ENSDARG0000004024915
tlr2 / toll-like receptor 2 / O60603*ENSDARG0000003775815
TLR8 / toll like receptor 8 / Q9NR97*ENSDARG0000010483215
tlr5a / toll-like receptor 5a / TLR5* / O60602* / toll like receptor 5*ENSDARG0000004441515
tlr9 / toll-like receptor 9 / Q9NR96* / AC097637.1*ENSDARG0000004449015
tlr4ba / toll-like receptor 4b, duplicate a / TLR4* / Q9QUK6* / O00206* / toll like receptor 4*ENSDARG0000001974214


Protein motifs (from Interpro)
Interpro ID Name
 IPR000157  Toll/interleukin-1 receptor homology (TIR) domain
 IPR001611  Leucine-rich repeat
 IPR003591  Leucine-rich repeat, typical subtype
 IPR026906  Leucine rich repeat 5
 IPR032675  Leucine-rich repeat domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007165 signal transduction IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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