ENSDARG00000026663


Danio rerio

Features
Gene ID: ENSDARG00000026663
  
Biological name :tlr19
  
Synonyms : tlr19 / toll-like receptor 19
  
Possible biological names infered from orthology : Q6R5N8 / Tlr13 / Toll-like receptor 13
  
Species: Danio rerio
  
Chr. number: 16
Strand: -1
Band:
Gene start: 22722352
Gene end: 22729491
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000115820
Ensembl peptide - ENSDARP00000150577
swissprot - F1Q6F4
ZFIN ID - ZDB-GENE-040220-3
Ensembl - ENSDARG00000026663
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Tlr13ENSMUSG00000033777Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
tlr19 / toll-like receptor 19 / Tlr13* / Q6R5N8* / Toll-like receptor 13 *ENSDARG0000007039297
tlr20.2 / tlr20.4 / toll-like receptor 20, tandem duplicate 2 / Tlr13* / Q6R5N8* / Toll-like receptor 13 *ENSDARG0000008870124
tlr22 / toll-like receptor 22ENSDARG0000010404523
tlr21 / toll-like receptor 21ENSDARG0000005804523
TLR8 / toll like receptor 8 / Q9NR97*ENSDARG0000010483217
senp7a / SUMO1/sentrin specific peptidase 7a / Tlr13* / Q6R5N8* / Toll-like receptor 13 *ENSDARG0000010952217
senp7a / SUMO1/sentrin specific peptidase 7a / Tlr13* / Q6R5N8* / Toll-like receptor 13 *ENSDARG0000011513617
tlr3 / toll-like receptor 3 / O15455* / Q99MB1* / Mus musculus toll-like receptor 3 (Tlr3), transcript variant 3, mRNA.*ENSDARG0000001606516
tlr7 / toll-like receptor 7 / Q9NYK1*ENSDARG0000006881216
tlr5b / toll-like receptor 5b / TLR5* / O60602* / toll like receptor 5*ENSDARG0000005232215
tlr5a / toll-like receptor 5a / TLR5* / O60602* / toll like receptor 5*ENSDARG0000004441515
tlr9 / toll-like receptor 9 / Q9NR96* / AC097637.1*ENSDARG0000004449015
tlr4ba / toll-like receptor 4b, duplicate a / TLR4* / Q9QUK6* / O00206* / toll like receptor 4*ENSDARG0000001974214
tlr4al / toll-like receptor 4a, like / TLR4* / Q9QUK6* / O00206* / toll like receptor 4*ENSDARG0000007567114
tlr2 / toll-like receptor 2 / O60603*ENSDARG0000003775814
tlr4bb / toll-like receptor 4b, duplicate b / TLR4* / Q9QUK6* / O00206* / toll like receptor 4*ENSDARG0000002204813
tlr1 / toll-like receptor 1 / TLR6* / TLR10* / Q15399* / Q9BXR5* / Q9EPQ1* / Q9Y2C9* / toll like receptor 6* / toll like receptor 10*ENSDARG0000010064913
tlr18 / toll-like receptor 18ENSDARG0000004024912
tlr8b / toll-like receptor 8b / TLR8* / Q9NR97* / P58682* / toll like receptor 8*ENSDARG0000007367511
cd180 / CD180 molecule / Q62192* / Q99467* / CD180 antigen *ENSDARG000000937509


Protein motifs (from Interpro)
Interpro ID Name
 IPR000157  Toll/interleukin-1 receptor homology (TIR) domain
 IPR001611  Leucine-rich repeat
 IPR003591  Leucine-rich repeat, typical subtype
 IPR032675  Leucine-rich repeat domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007165 signal transduction IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

1 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr