ENSDARG00000040249


Danio rerio

Features
Gene ID: ENSDARG00000040249
  
Biological name :tlr18
  
Synonyms : tlr18 / toll-like receptor 18
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 16
Strand: -1
Band:
Gene start: 29387675
Gene end: 29405009
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000124565
Ensembl peptide - ENSDARP00000144238
Ensembl peptide - ENSDARP00000106955
NCBI entrez gene - 403133     See in Manteia.
RefSeq - NM_001089350
RefSeq Peptide - NP_001082819
swissprot - A3KH14
ZFIN ID - ZDB-GENE-040220-2
Ensembl - ENSDARG00000040249
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TLR15ENSGALG00000008166Gallus gallus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
tlr2 / toll-like receptor 2 / O60603*ENSDARG0000003775826
tlr1 / toll-like receptor 1 / TLR6* / TLR10* / Q15399* / Q9BXR5* / Q9EPQ1* / Q9Y2C9* / toll like receptor 6* / toll like receptor 10*ENSDARG0000010064925
tlr22 / toll-like receptor 22ENSDARG0000010404520
tlr7 / toll-like receptor 7 / Q9NYK1*ENSDARG0000006881219
tlr9 / toll-like receptor 9 / Q9NR96* / AC097637.1*ENSDARG0000004449019
tlr4ba / toll-like receptor 4b, duplicate a / TLR4* / Q9QUK6* / O00206* / toll like receptor 4*ENSDARG0000001974219
tlr4al / toll-like receptor 4a, like / TLR4* / Q9QUK6* / O00206* / toll like receptor 4*ENSDARG0000007567119
tlr4bb / toll-like receptor 4b, duplicate b / TLR4* / Q9QUK6* / O00206* / toll like receptor 4*ENSDARG0000002204819
tlr3 / toll-like receptor 3 / O15455* / Q99MB1* / Mus musculus toll-like receptor 3 (Tlr3), transcript variant 3, mRNA.*ENSDARG0000001606519
TLR8 / toll like receptor 8 / Q9NR97*ENSDARG0000010483219
tlr5b / toll-like receptor 5b / TLR5* / O60602* / toll like receptor 5*ENSDARG0000005232218
tlr5a / toll-like receptor 5a / TLR5* / O60602* / toll like receptor 5*ENSDARG0000004441518
tlr21 / toll-like receptor 21ENSDARG0000005804518
tlr20.2 / tlr20.4 / toll-like receptor 20, tandem duplicate 2 / Tlr13* / Q6R5N8* / Toll-like receptor 13 *ENSDARG0000008870116
tlr19 / toll-like receptor 19 / Tlr13* / Q6R5N8* / Toll-like receptor 13 *ENSDARG0000007039215
tlr19 / toll-like receptor 19 / Tlr13* / Q6R5N8* / Toll-like receptor 13 *ENSDARG0000002666313
tlr8b / toll-like receptor 8b / TLR8* / Q9NR97* / P58682* / toll like receptor 8*ENSDARG0000007367513
senp7a / SUMO1/sentrin specific peptidase 7a / Tlr13* / Q6R5N8* / Toll-like receptor 13 *ENSDARG0000011513612
senp7a / SUMO1/sentrin specific peptidase 7a / Tlr13* / Q6R5N8* / Toll-like receptor 13 *ENSDARG0000010952211
cd180 / CD180 molecule / Q62192* / Q99467* / CD180 antigen *ENSDARG0000009375011


Protein motifs (from Interpro)
Interpro ID Name
 IPR000157  Toll/interleukin-1 receptor homology (TIR) domain
 IPR001611  Leucine-rich repeat
 IPR003591  Leucine-rich repeat, typical subtype
 IPR032675  Leucine-rich repeat domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007165 signal transduction IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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