ENSDARG00000052322


Danio rerio

Features
Gene ID: ENSDARG00000052322
  
Biological name :tlr5b
  
Synonyms : tlr5b / toll-like receptor 5b
  
Possible biological names infered from orthology : O60602 / TLR5 / toll like receptor 5
  
Species: Danio rerio
  
Chr. number: 20
Strand: 1
Band:
Gene start: 51466046
Gene end: 51476849
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000124387
Ensembl peptide - ENSDARP00000143699
NCBI entrez gene - 403139     See in Manteia.
swissprot - A0A286Y971
swissprot - F8W3J5
ZFIN ID - ZDB-GENE-040219-15
Ensembl - ENSDARG00000052322
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TLR5ENSGALG00000009392Gallus gallus
 TLR5ENSG00000187554Homo sapiens
 Tlr5ENSMUSG00000079164Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
tlr5a / toll-like receptor 5a / TLR5* / O60602* / toll like receptor 5*ENSDARG0000004441573
tlr7 / toll-like receptor 7 / Q9NYK1*ENSDARG0000006881222
tlr22 / toll-like receptor 22ENSDARG0000010404521
TLR8 / toll like receptor 8 / Q9NR97*ENSDARG0000010483221
tlr21 / toll-like receptor 21ENSDARG0000005804521
tlr3 / toll-like receptor 3 / O15455* / Q99MB1* / Mus musculus toll-like receptor 3 (Tlr3), transcript variant 3, mRNA.*ENSDARG0000001606521
tlr9 / toll-like receptor 9 / Q9NR96* / AC097637.1*ENSDARG0000004449021
tlr4bb / toll-like receptor 4b, duplicate b / TLR4* / Q9QUK6* / O00206* / toll like receptor 4*ENSDARG0000002204818
tlr1 / toll-like receptor 1 / TLR6* / TLR10* / Q15399* / Q9BXR5* / Q9EPQ1* / Q9Y2C9* / toll like receptor 6* / toll like receptor 10*ENSDARG0000010064918
tlr18 / toll-like receptor 18ENSDARG0000004024918
tlr4al / toll-like receptor 4a, like / TLR4* / Q9QUK6* / O00206* / toll like receptor 4*ENSDARG0000007567118
tlr19 / toll-like receptor 19 / Tlr13* / Q6R5N8* / Toll-like receptor 13 *ENSDARG0000007039217
tlr4ba / toll-like receptor 4b, duplicate a / TLR4* / Q9QUK6* / O00206* / toll like receptor 4*ENSDARG0000001974217
tlr2 / toll-like receptor 2 / O60603*ENSDARG0000003775817
tlr19 / toll-like receptor 19 / Tlr13* / Q6R5N8* / Toll-like receptor 13 *ENSDARG0000002666316
tlr20.2 / tlr20.4 / toll-like receptor 20, tandem duplicate 2 / Tlr13* / Q6R5N8* / Toll-like receptor 13 *ENSDARG0000008870116
tlr8b / toll-like receptor 8b / TLR8* / Q9NR97* / P58682* / toll like receptor 8*ENSDARG0000007367515
senp7a / SUMO1/sentrin specific peptidase 7a / Tlr13* / Q6R5N8* / Toll-like receptor 13 *ENSDARG0000011513613
cd180 / CD180 molecule / Q62192* / Q99467* / CD180 antigen *ENSDARG0000009375012
senp7a / SUMO1/sentrin specific peptidase 7a / Tlr13* / Q6R5N8* / Toll-like receptor 13 *ENSDARG0000010952212


Protein motifs (from Interpro)
Interpro ID Name
 IPR000157  Toll/interleukin-1 receptor homology (TIR) domain
 IPR000483  Cysteine-rich flanking region, C-terminal
 IPR001611  Leucine-rich repeat
 IPR003591  Leucine-rich repeat, typical subtype
 IPR032675  Leucine-rich repeat domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002253 activation of immune response IMP
 biological_processGO:0002376 immune system process IEA
 biological_processGO:0007165 signal transduction IEA
 biological_processGO:0045087 innate immune response IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0001094 whole organism whole organism increased amount , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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